Pseudomonas wayambapalatensis: HU734_003515
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Entry
HU734_003515 CDS
T08016
Symbol
hfq
Name
(GenBank) RNA chaperone Hfq
KO
K03666
host factor-I protein
Organism
pwy
Pseudomonas wayambapalatensis
Pathway
pwy02024
Quorum sensing
pwy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pwy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HU734_003515 (hfq)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HU734_003515 (hfq)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pwy03019
]
HU734_003515 (hfq)
03036 Chromosome and associated proteins [BR:
pwy03036
]
HU734_003515 (hfq)
Messenger RNA biogenesis [BR:
pwy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
HU734_003515 (hfq)
Chromosome and associated proteins [BR:
pwy03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
HU734_003515 (hfq)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
LSM
Hfq_1
Motif
Other DBs
NCBI-ProteinID:
QXI43870
LinkDB
All DBs
Position
793020..793280
Genome browser
AA seq
86 aa
AA seq
DB search
MSKGHSLQDPYLNTLRKEKVPVSIYLVNGIKLQGQIESFDQFVVLLKNTVSQMVYKHAIS
TVVPARPVRLPSPSDSEHGDSEPGNA
NT seq
261 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaagggcattcgctacaagacccttacttgaacaccttgagaaaagaaaaggtc
ccggtttcgatctacctggtcaacggcatcaagctgcaaggccagatcgagtccttcgac
cagttcgtcgtgctgctgaagaacaccgtcagccagatggtctacaagcacgcgatttcc
actgtcgtacctgcccgtccggttcgtctgccaagcccgtccgattccgaacacggcgac
agcgagccaggcaacgcctga
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