Pseudomonas wayambapalatensis: HU734_004335
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Entry
HU734_004335 CDS
T08016
Name
(GenBank) ABC transporter ATP-binding protein
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
pwy
Pseudomonas wayambapalatensis
Pathway
pwy02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pwy00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HU734_004335
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pwy02000
]
HU734_004335
Transporters [BR:
pwy02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
HU734_004335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
TOBE_2
AAA_21
SMC_N
AAA_29
AAA_25
nSTAND_NTPase5
AAA_16
AAA_22
RsgA_GTPase
AAA_23
DO-GTPase2
NACHT
AAA_15
Motif
Other DBs
NCBI-ProteinID:
QXI44019
LinkDB
All DBs
Position
980925..982007
Genome browser
AA seq
360 aa
AA seq
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MSEDTKLSTSIDIEHVTKTYGSFAALDDVSLNIRSGEFLSLLGSSGSGKTTLLMALAGFV
RPDAGSIRFGGREMVFEPPHKRDLGMMFQNYALFPHMNVFQNVAYPLKLRGYSRDEIRKR
VGEALEMVELDKLVGRRIDEMSGGQRQRIALARAIVFEPKILLMDEPLSALDKRLRETMQ
LEIRRLHERLGMTVVYVTHDQREALTMSDRIAVMSQGRIQQIDTPESLYERPANRFIAEF
VGESSFLPVAMREGRAWFRDQPLQAVFSEGCLNNPSILLRPEKLRFVDDGQQGLNLFRGQ
VHDVIYQGESQLLQVDLGEGTQVSIRRPSRSSSGDRLPTSGDHVVLGLHPQDSLIVGDSA
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaagatacgaagctctcgacctccatcgacatcgagcatgtcaccaagacctac
ggcagctttgccgcgctcgatgacgtctccctgaacatccgcagtggcgagttcctgtcg
ctgctgggctcgtccggttcgggcaagaccaccttgctgatggccctggccggcttcgtg
cgcccggacgccggcagcatccgcttcggcgggcgggaaatggtgttcgagccgccgcac
aagcgcgacctgggcatgatgttccagaactacgcactgttcccgcacatgaacgtgttc
cagaacgttgcctacccgctgaagctgcgcggctacagccgtgacgaaatccgcaagcga
gtcggcgaggcgctggagatggtcgagctggacaagctggtcgggcggcgcatcgacgag
atgtccggtggccagcgccagcgcatcgccctggcccgagcgatcgtcttcgagccgaag
atcctgctgatggacgagccgctgtcggcgctggataaacgcctgcgcgagaccatgcag
ctggagatccgtcgcctgcacgagcgcctcggcatgaccgtggtctacgtcacccacgac
cagcgcgaggcactgaccatgtccgaccgcattgcggtgatgagccaagggcggattcag
cagatcgacacccccgaaagcctctacgaacgcccggccaaccgcttcatcgccgagttc
gtcggcgagtcgtcgttcctgccggtggccatgcgcgagggcagggcatggttccgcgac
cagccgttgcaggcggtgttcagcgaaggctgcctgaacaacccgagtatcctcctgcgc
cccgagaaactgcgcttcgtcgatgacggccagcagggcctgaacctgttccgtgggcag
gtccacgacgtcatctaccagggcgaaagccagttgctgcaagtggacctgggcgaaggc
acgcaggtgtcgatccgccgcccctcgcgcagttcctccggtgaccgcctgccgacgagt
ggcgatcacgtggtcctcggcctgcacccgcaggacagcctgatcgtgggggactcggca
tga
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