Pseudomonas wayambapalatensis: HU734_006145
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Entry
HU734_006145 CDS
T08016
Name
(GenBank) Crp/Fnr family transcriptional regulator
KO
K10914
CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
pwy
Pseudomonas wayambapalatensis
Pathway
pwy02020
Two-component system
pwy02024
Quorum sensing
pwy02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pwy00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
HU734_006145
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HU734_006145
02025 Biofilm formation - Pseudomonas aeruginosa
HU734_006145
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pwy03000
]
HU734_006145
Transcription factors [BR:
pwy03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
HU734_006145
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
HTH_Crp_2
HTH_24
MarR_2
HTH_3
HTH_11
MarR
GntR
TrmB
HTH_29
HTH_23
Sigma70_r4
Rrf2
HVO_A0261_N
DUF6417
HTH_41
HTH_36
KNTC1_N
HTH_5
Motif
Other DBs
NCBI-ProteinID:
QXI44355
LinkDB
All DBs
Position
1408226..1408921
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AA seq
231 aa
AA seq
DB search
MDNPQAWRAQLSHGQWFRQLPAQVQDSLLALARSRELAAGQCLFQRGDPPCGLYAVLEGA
MRVGAVSRDGKEALLTLVEPPYWFGEISLFDGQPRTHDAFAEGVTQLLWIPQAALLDWLA
QHPQHWRDLALLMSHKLRWVFVALEQQHLLAAGPRVAHRLLQIAEGYGERDVAQWRLQLS
QEQLALMLSLSRQTINQILKALEQAGVVQLGYGEVLILDAPRLREMAAHPG
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
atggacaacccccaagcctggcgtgcgcagttgagccacggccagtggtttcggcagttg
cccgctcaggttcaggatagcctgctggcactggcgcgttcgcgtgagctggcggccgga
cagtgcctgttccagcgtggtgacccgccctgcggtctgtatgcggtgctggagggcgcc
atgcgcgtcggcgcggtcagccgtgacggcaaggaagcgctgctgacgctggtcgagccg
ccttactggttcggcgagatcagcctgttcgacggccagccgcgtacccacgatgccttt
gccgaaggtgtcacgcagctgttgtggatacctcaggcagcgctgctcgactggttggcg
cagcatccgcagcactggcgcgacctggccttgctgatgagccacaagctgcgctgggtg
ttcgttgcgcttgagcagcagcacctgctggccgcggggccgcgtgtggcccatcggctg
ttgcagatcgccgaaggctatggcgagcgcgatgttgcccaatggcggctgcagttgtcg
caggagcaactggcgctgatgctgtcgctgtcgcgccagaccatcaaccagatcctcaag
gcgctggagcaggcgggggtggtgcaactgggctatggcgaagtgctgatcctcgatgcg
ccgaggctgcgggagatggctgcgcatccaggctga
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integrated database retrieval system
