Pseudomonas wayambapalatensis: HU734_006545
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Entry
HU734_006545 CDS
T08016
Symbol
truD
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
pwy
Pseudomonas wayambapalatensis
Brite
KEGG Orthology (KO) [BR:
pwy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pwy03016
]
HU734_006545 (truD)
Enzymes [BR:
pwy01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
HU734_006545 (truD)
Transfer RNA biogenesis [BR:
pwy03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HU734_006545 (truD)
Prokaryotic type
HU734_006545 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
QXI44433
LinkDB
All DBs
Position
1500847..1501905
Genome browser
AA seq
352 aa
AA seq
DB search
MTELELLGPRASGEALGRAVLKAVADDFQVDEVLDIPLSGQGEHLWLWVEKRDLNTEEAA
RRLARAAGVPVRAISYAGLKDRQALTRQWFSLHLPGKADPDLSRAEDDSLRVLKQVRHQR
KLQRGAHSANGFTLRLTGLSADHQALDARLEQLKVQGVPNYFGAQRFGHAAGNVHDALDW
AAREALPEQRNVRSRLLSAGRSYLFNQVLAARVADGSWNQAQVGDLLAFTDSRSFFPAGE
QECSDPRLTILDLHPTGPMWGAGLPSSAGGTAALETAVGERHPALCQWLGRVGLDHERRI
LRLPIGRLTWHYPEPDILQLEFVLPAGCFATVVVRELVDLVPAGQTESPCVF
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaactggaactgttgggcccgcgcgccagcggcgaggcccttggccgcgctgtg
ctcaaggccgtcgccgatgattttcaggtcgatgaagtgctcgacatccccctgtccggt
caaggcgaacacctgtggctgtgggtcgagaagcgcgacctgaacaccgaggaagctgcc
cgacgcctggcgcgcgcggccggtgtgccggttcgtgctatcagttatgccggcctgaag
gaccgtcaggccctgacccggcagtggttcagcctgcacctgccaggcaaggccgatcct
gacctgtcccgtgccgaagacgacagcctgcgcgtgctcaaacaggtgcgtcaccagcgc
aagctgcagcgtggcgcacattcggccaatggcttcaccctgcgactgacgggcctgagc
gccgatcaccaggcgctggacgcccgtctggaacagctcaaggtgcagggcgtaccgaac
tatttcggtgcccagcgcttcggccatgccgccgggaacgtgcacgatgcgctcgactgg
gcggcccgagaggcactgccggagcagcgcaatgtgcgttcgcggctgctgtctgcgggg
cgcagctacctgttcaaccaggtactggccgcgcgagtggctgacggaagctggaaccag
gcgcaggttggcgatcttctggccttcacggatagccgtagcttctttccggctggcgag
caggaatgctccgatcctcgactgacaattctcgacctccatcccaccggccccatgtgg
ggcgcgggccttccgtcgagcgcgggcgggaccgcggcgctggaaacggcggtcggcgaa
cgccatcctgcactctgccaatggctgggcagggtaggactggatcacgaacggcgcatc
ctgcggctccctattgggcggctgacgtggcattatcccgagcctgatatcctgcaactg
gaattcgtccttccggccggatgcttcgccaccgtggtggtgcgcgaacttgtggatctg
gtgccggcagggcagacggaaagcccatgcgtattctga
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