KEGG   Pseudomonas wayambapalatensis: HU734_006860
Entry
HU734_006860      CDS       T08016                                 
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
  KO
K03551  holliday junction DNA helicase RuvB [EC:5.6.2.4]
Organism
pwy  Pseudomonas wayambapalatensis
Pathway
pwy03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pwy00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    HU734_006860 (ruvB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pwy03400]
    HU734_006860 (ruvB)
Enzymes [BR:pwy01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     HU734_006860 (ruvB)
DNA repair and recombination proteins [BR:pwy03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     HU734_006860 (ruvB)
    RecFOR pathway proteins
     HU734_006860 (ruvB)
SSDB
Motif
Pfam: RuvB_N AAA_lid_4 RuvB_C AAA AAA_5 AAA_22 TIP49 AAA_3 nSTAND3 Mg_chelatase AAA_14 AAA_16 AAA_17 AAA_2 RNA_helicase Rad17 ABC_tran AAA_28 AAA_18 NTPase_1 NB-ARC AAA_24 TsaE RsgA_GTPase NPHP3_N
Other DBs
NCBI-ProteinID: QXI44490
LinkDB
Position
1556893..1557939
AA seq 348 aa
MIEADRLIAASGRDREEVQDRAIRPLSLDEYIGQPVVREQMGLFIQAARGRNESLDHTLI
FGPPGLGKTTLANIIAHEMGVSVKSTSGPILERPGDLAAMLTNLEPHDVLFIDEIHRLSP
VVEEVLYPAMEDFQLDIMIGEGPAARSIKLDLPPFTLVGATTRAGMLTNPLRDRFGIVQR
LEFYSNQDLATIVSRSANILGLAIEDKGAFEIARRARGTPRIANRLLRRVRDYAEVRAKG
QITKEIADKALNLLDVDERGFDHSDRRLLLTMIEKFDGGPVGVDNLAAAISEERHTIEDV
LEPYLIQQGYIMRTPRGRVVTRHAYLHFGLNIPGRFAEGGEFSDPDDE
NT seq 1047 nt   +upstreamnt  +downstreamnt
gtgatcgaagccgaccgcctgatcgccgccagcgggcgcgaccgcgaagaggtccaggac
cgcgccattcgcccgttgagcctggacgagtacatcggccagccggtggtgcgcgagcag
atgggcctgttcatccaggccgcccgtggccgcaacgagtccctcgatcacaccttgatc
ttcggtccgcccggtctgggcaagaccacccttgccaatatcatcgcccacgagatgggg
gtttcggtcaagagcacgtccggcccgatcctcgagcgtccgggtgatctggcggcgatg
ctgaccaatctcgagccgcacgacgtgctgttcatcgatgaaatccatcgcctctcgcca
gtggtcgaggaggtgctctacccggcgatggaggacttccagctcgacatcatgatcggt
gaggggcctgccgcacgctcgatcaagctcgacctgccgccgttcaccctggttggtgcg
accacccgggccgggatgctcaccaacccgctgcgtgaccgtttcggcatcgtccagcgc
ctggagttctacagcaaccaggacctggcgaccatcgtcagccggtcggcgaacatcctg
gggcttgccatcgaagacaagggcgctttcgagatcgcccgtcgcgcccgcggtacgccg
cggatcgccaaccgcctgctacgccgcgtgcgtgactacgccgaggtgcgtgcaaagggc
cagatcaccaaggaaatcgccgacaaggcgttgaacctgctggatgtcgacgagcgcggt
ttcgaccattccgaccggcgcctgctgctgaccatgatcgagaaattcgatggcggaccg
gtcggtgtggacaacctggcggctgcgatcagcgaagagcggcacaccatcgaggatgtc
ctcgagccgtacctgatccagcagggctacatcatgcgtacaccgcgtggccgcgtggtc
acccgtcacgcctacctgcatttcggcctgaacattccggggcgctttgcagagggcgga
gaattttctgatcctgacgatgagtga

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