Pseudomonas wayambapalatensis: HU734_006920
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Entry
HU734_006920 CDS
T08016
Name
(GenBank) YadA-like family protein
KO
K21449
trimeric autotransporter adhesin
Organism
pwy
Pseudomonas wayambapalatensis
Brite
KEGG Orthology (KO) [BR:
pwy00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pwy02000
]
HU734_006920
Transporters [BR:
pwy02000
]
Other transporters
Pores ion channels [TC:
1
]
HU734_006920
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
YadA_head
YadA_stalk
YadA_anchor
ESPR
DUF3394
Motif
Other DBs
NCBI-ProteinID:
QXI44500
LinkDB
All DBs
Position
1566916..1571733
Genome browser
AA seq
1605 aa
AA seq
DB search
MLWLEGEQGFNSGASKVLRISAPLSKSGGTMNHIFRVVWSTALGRLVVTSEHAVSRRSTS
KCRVAAVGIYLPLLCGMPDSSSAYEAGGGDDCNGSPTRIAIGSSATGCNDNAIAIGSGSG
ASGGSAISLGVNTRSTGSFSLAIGSGTQATADNAFAFGSGSMASAANTVAIGRLASASVR
GGSALGDRANASGVMALSLGSYSQATADRSIGLGYSSNASGPDSFAAGNNAAASGSQSIA
LGANSAATFNGDIALGDGAMASGSDNYSAISIGRASSAVGMDAIAYGNSANASADYAMAV
GNLSAASGEASSAFGTGSNASGSYSLAAGSNSEATSHLSTAVGNNALVIGEGSSAFGHGA
TVGMRDGDGNDTAADFALAVGSNASATATDASAVGNNATASGEGSSAFGSESLASQLSTT
AMGSGARARAVGSSAFGSGAVADGENSLAIGGSSSSQGARSIAVGYGSIATAADAISLGY
FSIVAGQGSLSIGTGNQVIGERSGAIGDPSYVTGNGTYTLGNDNGSPSAAIAADDAGIFG
NGNFLGDNATGSRIIGNSNGTEDTPINVADAFILGNNASVTVANSVVLGSNSIANGNTLG
DSPFQPLDAAGNTIEVAGTAPVGEVSVGAADSERRITNVAAGSADTDAVNVSQLSAVNEK
ADYASQGFNLGVNGSSTSNVAPGEAVRFLDGANIELTQDGANITIATAPDISIDSLSING
GGPSIDASGIDMGGNTITALGDGAVNADSTDAINGSQLFGQASNLGNIIGGNTTINPDSG
EISTSNLGGTGEDTINGAIGAINTAANAGWNLSDAEGNTANIGPNGGVTFSGDDNLEVTQ
TGEDDRGQVAIRLNRNLDLNSVTTGNSRLDDAGLEVTAISDSGDVTSTTVVTSAGVNVSG
GEGRGGSALTQTGLTVASVEVDGEGNPLSAVTVAADGIDMGGSTITALRDGAVNANSTEA
INGSQLFRHAANVGDIIGGNTTIDPNTGEIITSNLGGTGEDTIDAALAKTSNAANAGWNV
TDDYGNAANIGPNGSVAFTGDNNLSVEQVGDDNDGQVAIRLNRNLELDSVTLPGGLSINA
DGIDMNGQTISNLGDPTARGDAVNLAYFDRNRTRYYSVNDGGEEGGNYDNNGATGRGAIA
VGVDAQARAENAIAIGRGATVGTSNGIALGADSISEEAIATEGSMIAGQMYTYAGSAPVG
NVSLGSAGKERTLTNIAAGRVTSESTDAVNGSQLYATNQAVAAVQDDVFRAQTDITALDG
RVTSVEGNITNLSGDIERLGDQAVQYSTNEDGSVDYSSVELKGEGGTTIGNLAAGDIAEN
SREAVNGSQLWEMQNAITDINQGGSRYFRANADGPAAQANGANSVASGPSSVANGDNSVA
MGNGAVAEAEGSIALGAGSRATRAGMNGAEEAFSGHSVASTQGAVSVGSENKERQITNVA
GGTEATDAVNVRQLSSVQAGAVNYDRHVDGSVNYSSVTMGQAGSPTRVHNVASGEADTDA
ANVGQLRAMDQNYRRQIDGLGRKIDDVKDQANAGTASALAAAAIPQATIAGKSMIAVGGG
TYQGESAVAVGFSWLSDNGRWTTRLNLTGDTQNHAGAAVGVGFHW
NT seq
4818 nt
NT seq
+upstream
nt +downstream
nt
ttgctgtggctggaaggtgagcaagggtttaattcaggtgcatctaaagtcttaagaatt
tccgccccgttgtccaagtctggagggaccatgaatcatatttttcgagtcgtgtggagt
actgcattggggcgacttgttgttacgtccgagcatgccgtgtcgcggcgctctacaagc
aaatgtagggtggcagcagtgggtatctatcttcctttattatgtggcatgccggactcc
tcatctgcgtatgaagcaggcgggggggacgactgtaatggatcacctacgaggatcgct
atcggtagtagtgctacgggttgtaatgataatgccattgctatcggtagtggctccggc
gcttcgggtggttctgccatcagtctaggtgtcaacacgcgatcaacgggatctttttca
ttggccatcggttctggtacacaagccacagctgataacgcttttgcattcgggtctgga
tcgatggcatccgccgctaatacggttgcgataggacgtctggcaagtgcttcagtgagg
ggggggagtgcgcttggcgatagagccaatgcctccggtgtcatggctctgtctctcggt
tcttattctcaagcgactgcagatcgctcaattggattgggctatagctcaaacgcgagt
ggccccgactcattcgccgcgggaaacaatgcggcagcctcaggcagccaatcgatagct
ttgggagcaaactcggcagccacgttcaatggcgatattgccttaggtgatggcgccatg
gcgtcgggctccgacaactactcagctatctctatagggcgagcatcgagcgcggtaggg
atggatgccatcgcttacggaaactctgctaatgcttcggcagactatgccatggcagtt
ggaaacctctcagcggcaagtggtgaagcctcgtctgccttcggcacaggctcgaacgcc
agtggaagttattccctggcggctggcagcaattcggaagcaactagccatttgtcgact
gctgtaggtaataatgctctggtcattggggaaggctcttcggcttttggccatggtgca
accgtcggtatgcgagacggcgatggcaatgacactgcagctgatttcgcgttggccgta
ggcagtaatgcgagcgccactgcaactgatgcgtcggcagttggaaacaacgcgacggct
agtggagagggatcttcagcattcggctctgaatcgctggcaagtcagctatcgacgacc
gctatgggtagtggtgctcgtgcgcgcgctgtgggcagctctgcgtttggttcaggcgca
gtagccgatggtgagaattcccttgccataggtggctcatcctcatctcaaggcgccagg
tccatagctgtaggctatggctctatcgcgacagctgctgacgcgatttcactgggttat
ttttccatcgttgcgggccagggctctttgagtattggcaccggtaaccaagttatcggg
gagcgttcaggtgcaatcggtgaccccagctatgtaacgggtaatgggacctatacgcta
ggtaatgataacggcagtcccagcgcggccatcgccgccgatgatgccggtattttcggt
aatggaaactttctcggcgataacgctacgggtagccgcatcatcggcaacagtaatggc
accgaagatacccccatcaatgtcgccgacgctttcatactggggaacaatgcttcagtc
acggtggcgaacagcgtagtactaggttcgaactccatcgccaacggcaacaccctcggg
gattcacccttccagccgctggatgccgctggtaataccatcgaggtcgcaggaacggca
ccggtgggggaggtttcagtcggtgcagccgacagtgagcggcgtatcaccaacgttgcg
gcagggtcggcagatactgatgccgtcaacgtttctcagctctccgccgtcaacgagaaa
gcggattacgcgagtcaaggctttaatctcggtgtgaacgggagcagcacaagtaatgtt
gcaccaggtgaggctgtacgttttctcgacggcgccaatatcgaacttactcaagacggc
gccaatatcactatcgcgaccgccccagacatctccatcgatagtctgtcgatcaatggt
ggtggaccttctatcgacgccagcggtatcgatatgggcggcaacaccataaccgcgttg
ggtgacggtgccgtcaatgcggatagcaccgatgccatcaacggaagccagctattcgga
caggccagcaacctaggcaacatcatcggtggcaacacgacgatcaatccggactcgggc
gagatctccacgtcgaacctgggtggaactggcgaagacactatcaatggtgcgattggc
gctatcaataccgctgccaacgccggctggaacttgagcgatgctgagggtaacaccgcc
aacatcggtccgaatggcggcgtgactttctccggcgacgataatcttgaggtgacgcaa
actggcgaggacgataggggtcaggtcgccatccgactcaatcgcaatcttgacctcaac
agcgtcacgaccggcaatagccgactggatgatgccggcttggaggtaaccgctattagt
gacagtggcgatgtcactagcacaacggtagtcaccagcgctggcgtcaatgtgagcggt
ggcgagggtcgcggtgggagcgcattgactcaaactggcctgaccgtagcgtctgtggaa
gtcgatggggagggcaatccgctcagcgcggtaaccgttgctgccgatggcattgatatg
ggaggaagcaccattaccgcattgcgggatggggcagtcaatgcaaacagcaccgaggcc
atcaatggaagccagctattccgccacgccgccaatgtcggggacatcattggtggcaat
acgaccatcgatccgaacacgggtgaaattatcacttctaacttggggggcacgggtgaa
gacaccatcgatgccgcattggccaagactagtaatgcggcgaatgcaggttggaacgtt
acagatgactatggtaacgccgctaacatcggtccgaacggaagcgttgccttcacaggt
gacaacaacctgagtgttgaacaagttggtgatgataacgacggacaggttgccatcagg
ctcaatcggaacttagagctcgatagtgtgaccctacccggaggccttagtatcaacgcc
gatgggatcgatatgaatggtcaaactatctccaatcttggcgatcctactgcgcggggg
gacgccgtaaatctggcttacttcgatcgcaatcgtacgcgctattacagcgtcaatgat
ggtggagaagaaggcggtaactacgataacaacggagctaccggccgcggcgcgattgcc
gtcggtgtcgacgcccaggccagagccgaaaacgcgattgccatcggtagaggagcaaca
gtaggcaccagcaatggcattgctttgggcgcggactcgatctcagaggaagcgatcgcg
acggaaggcagcatgattgcagggcaaatgtacacttatgctggctcggcaccggtcgga
aacgtgagtttgggctctgcgggaaaagagcggacgctgacaaatattgccgctgggcgc
gtgacttccgaaagcacagacgccgtgaatggaagccagctatatgcaaccaatcaggct
gtggcagccgtacaggatgatgttttcagggcacaaactgatatcacagcgctcgatggg
cgtgtcaccagcgtcgagggtaacatcaccaacttgagtggagacatcgagcgcctgggt
gaccaggccgtgcagtacagcaccaatgaagatggtagcgtcgattacagctctgtcgaa
ctcaagggagaaggcggaacaaccatcggtaatttagccgctggcgacattgccgaaaac
agccgcgaggccgtcaatggcagtcagctttgggaaatgcagaacgccattactgatatc
aaccaaggtggcagccgttatttcagagcgaacgccgatggcccagccgcgcaggccaac
ggcgcgaatagtgttgcctcagggcccagtagcgtcgccaatggtgacaacagcgttgct
atgggtaacggtgcggtcgccgaggcagaaggcagtatcgcgcttggagcaggctcacgc
gccacccgcgcaggcatgaacggtgctgaggaagccttttccggccatagcgttgcatcg
actcagggcgcggtttcagtcggcagcgagaataaagagcgtcagattactaatgtggcc
ggcggtaccgaggcaaccgatgcagtcaatgttcgccaattgagctcggtgcaggccggg
gcggtgaattacgaccgtcacgtagatggcagtgtcaactatagctcggtcacgatgggt
caagcgggctcgccgacgcgggtccataacgtcgcgtcgggcgaggccgatacggacgcg
gccaatgtagggcagctcagggcgatggatcaaaattatcgtcgccagatcgatgggctt
ggaagaaagatcgacgatgtcaaagatcaggccaatgccggtacggcaagcgccctggct
gcggctgccattcctcaagcaactatcgcgggtaaaagcatgatcgccgtgggcggggga
acgtatcagggagaatcggcagtcgctgtcggcttttcctggctatcggataacggtcgg
tggacgacgcgtttaaacctcacgggagatacgcaaaaccacgcaggcgcggctgtaggc
gtcggcttccactggtaa
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integrated database retrieval system