Pseudomonas wayambapalatensis: HU734_008200
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Entry
HU734_008200 CDS
T08016
Name
(GenBank) sigma-54-dependent transcriptional regulator
KO
K03721
transcriptional regulator of aroF, aroG, tyrA and aromatic amino acid transport
Organism
pwy
Pseudomonas wayambapalatensis
Brite
KEGG Orthology (KO) [BR:
pwy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pwy03000
]
HU734_008200
Transcription factors [BR:
pwy03000
]
Prokaryotic type
Other transcription factors
Others
HU734_008200
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_50
ACT
PAS_8
PAS
AAA_5
PAS_4
ACT_4
HTH_38
PAS_9
ACR10_N
Motif
Other DBs
NCBI-ProteinID:
QXI44740
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Position
1849402..1850961
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AA seq
519 aa
AA seq
DB search
MRIKVHCQNRIGILRDILNLLVEYGINVLRGEVGGDHGNAIYLHCPNLINLQFQALRPKF
EAIAGVFGVKRVGLMPSERRHMELNALLGALEFPVLSVDMGGSIVAANRAAAHLLGVRVD
EVPGLPLARYVEDFDLPELVRANKSRINGLRIKVKGDVFLADIAPLQSEHDDSEALAGAV
LTLHRADRIGERIYNVRKQELRGFDSIFQSSRVMASVVREARRMAPLDAPLLIEGETGTG
KELLARACHLASPRGQAPLMALNCAGLPESMAETELFGYGPGAFEGARAEGKLGLLELTA
GGTLFLDGVGEMSPRLQVKLLRFLQDGCFRRVGSDEEVYLDVRVICATQVDLSELCARGE
FRQDLYHRLNVLSLHIPPLRECMDGLEGLAQHFLDQASRQIGCALPRLAPAAMDKLSQYH
WPGNVRQLENVLFQAVSLCEGGVVKGEHIRLPDYGARQPLGEFSLEGELAQIVGRFEKAV
LESLMAEFPTSRALGKRLGVSHTTIANKLREYSLGKSVD
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgcgtatcaaagtccattgccagaaccgcatcggcatcctgcgcgacatcctcaacctg
ttggtggagtacggcatcaacgtgttgcgtggcgaggtcggcggcgaccatggcaacgcc
atctacctgcactgtccaaacctgatcaacctgcagttccaggccttgcgtccgaaattc
gaggccatcgccggggtgttcggggtcaagcgcgtcggcctgatgcccagcgagcggcgg
cacatggagctcaatgcgttgctcggggcgctggagtttccggtgttgtcggtcgacatg
ggaggcagcatcgtcgcagccaaccgtgctgcagcccatttgctcggggtgcgcgtcgat
gaggtgccggggctgccgctggcgcgctatgtcgaggatttcgacctgccggagctggtc
cgggccaacaaatcgcggatcaacggattgcgcatcaaggtcaagggtgacgtgttcctg
gccgatatcgcgcccttgcaatccgaacatgacgacagcgaagccctggcaggcgcggtg
ctgaccttgcaccgcgccgatcgcatcggcgagcgcatctacaacgtgcgcaagcaggag
ctgcgtggtttcgacagcatcttccagagttcacgggtgatggcctcggtagtgcgcgag
gcgcggcgcatggcgccgctggatgcgccgctgctgatcgagggggaaaccggcaccggc
aaggagttgctggcccgtgcctgtcacctggccagcccgcgtggccaggcgccactgatg
gcactcaactgcgcagggttgccggagtcgatggccgagaccgagctgttcggctatggc
cctggtgcgttcgagggggcgcgggccgagggcaagctggggttgctggagttgaccgcg
ggcggcacgctgtttctggacggggtgggggagatgagcccgcgcttgcaggtgaagttg
ctgcgctttctgcaggacggctgttttcgtcgggtcggcagcgatgaggaggtctatctg
gatgtgcgagtgatctgcgccacccaggtcgatttgtcggagctgtgcgcgcggggcgaa
ttccgccaagacctttatcaccggctcaacgtgctgtcgttgcacattccgccactgcgt
gagtgcatggatgggctggaggggctggcgcagcacttccttgaccaggccagtcggcag
atcggctgtgcgttgccacgtctggcgccggcggcgatggacaagttgagtcaatatcac
tggccgggcaatgtccggcaactggaaaacgtattgttccaggccgtgtcgttatgcgag
ggcggcgtggtcaagggcgaacatatacgtttgccggattatggtgcgcgacaacccttg
ggtgagttttcgctggaaggggagcttgcgcaaatcgtcgggcgctttgaaaaagcggtg
ttggaaagtttgatggcggagtttccaactagtcgggcgctggggaaaagactgggtgtt
tcccataccacgattgccaacaagttgcgggagtattcgttgggcaagtcagtggattga
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