Pseudomonas wayambapalatensis: HU734_009000
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Entry
HU734_009000 CDS
T08016
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
pwy
Pseudomonas wayambapalatensis
Pathway
pwy00071
Fatty acid degradation
pwy00280
Valine, leucine and isoleucine degradation
pwy00310
Lysine degradation
pwy00362
Benzoate degradation
pwy00380
Tryptophan metabolism
pwy00410
beta-Alanine metabolism
pwy00640
Propanoate metabolism
pwy00650
Butanoate metabolism
pwy00907
Pinene, camphor and geraniol degradation
pwy00930
Caprolactam degradation
pwy01100
Metabolic pathways
pwy01110
Biosynthesis of secondary metabolites
pwy01120
Microbial metabolism in diverse environments
pwy01200
Carbon metabolism
pwy01212
Fatty acid metabolism
Module
pwy_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
pwy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
HU734_009000 (fadB)
00650 Butanoate metabolism
HU734_009000 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
HU734_009000 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
HU734_009000 (fadB)
00310 Lysine degradation
HU734_009000 (fadB)
00380 Tryptophan metabolism
HU734_009000 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
HU734_009000 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
HU734_009000 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
HU734_009000 (fadB)
00930 Caprolactam degradation
HU734_009000 (fadB)
Enzymes [BR:
pwy01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
HU734_009000 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
HU734_009000 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
HU734_009000 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
HU734_009000 (fadB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
QXI44888
LinkDB
All DBs
Position
2028589..2030736
Genome browser
AA seq
715 aa
AA seq
DB search
MIYEGKAITVKALESGIVELKFDLKGESVNKFNRLTLNELRQAVDTIKADASIKGVIVSS
GKDVFIVGADITEFVDNFKLPEAELVAGNLEANRIFSDFEDLAVPTVVAINGIALGGGLE
MCLAADYRVMSSSAKIGLPEVKLGIYPGFGGTVRLPRLIGSDNAIEWIASGKENRAEDAL
KVGAVDAVVAPELLQAGALDLVKRAISGELDYKAKRQPKLEKLKLNAIEQMMAFETAKGF
VAGQAGPNYPAPVEAIKTIQKAANFGRDKALEVEAAGFAKLAKTSVAESLIGLFLNDQEL
KRKAKAHDEIARDVKQAAVLGAGIMGGGIAYQSAVKGTPILMKDIREEAIQLGLNEASKL
LGKRVEKGRLTPAKMAEALNAIRPTLSYGDFANVDIVVEAVVENPKVKQAVLAEVEGQVK
EDAILASNTSTISINLLAKALKRPENFVGMHFFNPVHMMPLVEVIRGEKSSEVAVATTVA
YAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVRIDKVMEKFGWPMGPAYL
MDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAVDALYEANRLGQKNGKGFYAYETDKRGKP
KKVADASVLDVLKPVIFEQREVSDEDIINWMMVPLCLETVRCLEDGIVETAAEADMGLVY
GIGFPPFRGGALRYIDSIGVAEFVALADKYADLGPLYHPTAKLREMAKNGQRFFN
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgatttacgaaggtaaagccatcacggttaaggctcttgaaagcggcatcgtcgaactg
aagttcgacctcaagggtgagtccgtcaacaaattcaaccgccttaccctgaacgagctg
cgtcaggccgtagacaccatcaaggccgacgcctccatcaagggtgtgatcgtcagcagc
ggcaaggacgtgttcatcgtcggtgccgacatcaccgaattcgtcgacaatttcaagctg
cccgaagccgagctggtggccggcaacctggaagccaaccgtatcttcagcgacttcgaa
gacctcgcggtgccaaccgtcgtggccatcaacggcatcgccctgggcggcggcctggaa
atgtgcctggcggcggattaccgcgtcatgtccagcagcgccaagatcggcctgccggaa
gtcaagctgggcatctacccgggctttggcggcaccgttcgcctgccgcgtctgatcggc
tcggacaatgccatcgagtggatcgcctcgggcaaggaaaaccgcgccgaagacgccctg
aaagtgggcgccgtcgatgccgtggtcgcccctgagctgctgcaggccggtgccctggac
ctggtcaagcgcgccatcagcggagagctggactacaaggccaagcgtcagcccaagctc
gagaagctcaagctcaacgccatcgagcagatgatggccttcgaaaccgccaagggcttt
gtcgccggtcaagccggcccgaactacccggctccggtcgaagccatcaagaccatccag
aaggccgccaactttggccgtgacaaggccctggaagtcgaagccgcaggctttgccaag
ctggccaagacctcggtcgccgagagcctgatcggcctgttcctgaacgatcaggagctc
aagcgcaaagccaaggcccatgacgagatcgctcgtgacgtgaagcaggctgccgtactc
ggcgccggcatcatgggtggcggtatcgcctaccagtcggcggtcaagggcacgccgatc
ctgatgaaggatatccgtgaagaagccatccagctgggcctgaacgaagcgtccaagctg
cttggcaagcgcgtcgagaaaggtcgcctgaccccggcgaagatggccgaggcactcaac
gccattcgcccgaccttgtcgtatggcgatttcgccaacgtcgacatcgtcgtcgaggcc
gtggtcgagaacccgaaggtcaagcaggcggtgctggccgaggtggaagggcaggtcaag
gaagacgcgattctggcgtcgaacacctcgaccatttcgatcaacctgctggccaaggcc
ctcaagcgtccggaaaacttcgttggcatgcacttcttcaacccggtgcacatgatgccg
ctggtcgaagtcattcgtggcgagaagtccagtgaagtggcggtcgccaccaccgtggcc
tacgccaagaagatgggcaagaacccgatcgtggtcaacgactgcccgggcttcctggtc
aaccgcgtactgttcccgtacttcggaggcttcgccaagctggtcagcgcaggcgtcgat
ttcgtgcgcatcgacaaggtcatggagaagttcggctggccgatgggcccggcctacctg
atggacgtggtcggcatcgacaccggccaccatggtcgcgacgtgatggctgaaggcttc
ccggatcgcatgaaggacgatcgccgctccgccgtcgacgccctgtacgaagccaatcgc
ctgggtcagaagaacggcaagggcttctatgcctacgaaaccgacaagcgcggcaaaccg
aagaaagtcgccgacgcgtccgtgctggacgtgctcaagccggtgatcttcgagcagcgt
gaagtcagtgacgaggacatcatcaactggatgatggtgccgctgtgcctggagaccgtg
cgctgcctggaagatggcatcgtcgaaactgcagccgaggcggacatgggcctggtctac
ggcatcggtttccctcccttccgcggtggtgcgctgcgctacatcgattcgatcggtgtt
gccgagttcgttgccctggccgacaagtacgccgatctgggtccgctgtaccacccgact
gcgaagctgcgtgaaatggccaagaacggccagcgcttcttcaactga
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