Pseudomonas wayambapalatensis: HU734_009055
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Entry
HU734_009055 CDS
T08016
Name
(GenBank) DEAD/DEAH box helicase
Organism
pwy
Pseudomonas wayambapalatensis
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
SWIM
SNF2_assoc
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QXI44898
LinkDB
All DBs
Position
complement(2039600..2042908)
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AA seq
1102 aa
AA seq
DB search
MSDVQKQVAENPSWKREFDAGALQRGERYAEQGRVEILSHGDARIEATCSGSGDSRYRQR
IIITFTSAGHCHVRGQCTCPVGENCKHCAAVLYTLAHRHTAQPAASDHLPHHLQHWLQGL
EQRPSTHQPGEDKRGRMVCYQLMLLGDQGCALRVRKGTRSDDGIRYSRVHSLYELLYEPP
KFVKEEDLRILRQLSAQNAPYGQERGYMLKGQEGGELLQRVLETGRLMFMEELPLLRRGQ
ERQAEFRWVRLDSGEYRGMWYSADKPLLCVLPLVPLFYFDVMTREVGTVAHSLDPHTAIQ
LSLAPDVPEHLIVPLSHKLNALNHQLPTPTTVKQELLDNIEPIPHLTLGSLEFSAYMPKT
GRMQRQMQHRAALSFDYDGLRTSGPDDKPLSRLVDSTSQRIRRQPQHEKRLRDTLRKLGF
KPATRQSKALPDSAGEMFQLPDDETWLRFAREELLRLREAGWKVDVHRDFAFNLHDVEDW
YANIQEAPGHEWFDLELGIVVDGQRHSLLPIVLQLLRSSPELLRPSELARRGDDEHLLID
LNRGRLDSPAMRVALPYGRIKAVMGTLGELYLHEDATGPTLRMERADAARLNDIEHLPLQ
WEGGEQLRNLGRRLRDARDLEVEPPKGLAATLRPYQQQGLNWLQALREMGTGGILGDDMG
LGKTLQTLAHLLLEKEAGRLTHPALAVMPTSLVPNWLDEAQRFAPDLRVLALHGPGRTRF
FGALHEYDLILTTYALLPRDLEQLQAQAWHVLVLDEAQNIKSSTSKAAQAARELQANQRL
CLTGTPMENNLGELWSIFHFLMPGWLGDQKRFNQDYRTPIERHGDRERLAHLASRVRPFL
LRRSKEQVARELPAKSEMVHWVDLSDAQRDTYETVRVAMDKKVRDEIARNGASRSQIVIL
DALLKLRQVCCDLRLVKGVEAKGNQADKGKLGSLMEMLEELLSEGRRVLLFSQFTSMLAL
IEQELEKRDIRYSLLTGDTRDRRAPVQQFQSGDSEVFLISLKAGGTGLNLTAADTVIHYD
PWWNPASENQATDRAYRIGQDKPVFVYKLITRGTVEEKIQQLQQEKAALAAGLLDGGQAG
QWRLGDDEIEALFAPLPGKRGR
NT seq
3309 nt
NT seq
+upstream
nt +downstream
nt
gtgagtgacgtgcagaagcaggttgcggaaaatccaagctggaagcgcgaattcgacgcc
ggtgccctgcagcgtggtgaacgctatgccgagcaaggcagggtagagatcctctcccac
ggcgatgcgcgcatcgaggcaacctgcagcggcagcggcgacagccgttatcgtcaacgg
atcatcatcaccttcacctccgccggacactgccatgttcgcggtcagtgcacctgcccg
gtcggcgagaattgcaagcactgcgccgccgtgctctacacgctcgcccaccgccatacg
gcacaaccggcggccagcgatcacctgccccatcacctgcaacactggctgcagggcctt
gagcaacgccccagcacccaccagcctggcgaagacaaacgcggacgcatggtctgctac
cagctcatgttgctgggcgatcagggctgcgccctgcgcgttcgcaagggcactcgcagc
gatgacggcatacgctacagccgggtgcactcgctgtacgaactgctctacgagccgccc
aagttcgtcaaggaagaagatctgcgcatcctgcgccagttgtcggcacagaacgcaccc
tacggccaggagcgcggctacatgctcaagggccaggaaggcggcgagctactgcaacgg
gtgctggaaaccggacgcctgatgttcatggaagaattgccgctgctgcgccgcggccag
gaacgccaggcggaatttcgctgggtgcgcctggacagcggcgaataccgcggcatgtgg
tacagcgccgacaaaccgctgctttgcgtcctgccgctggtgccgttgttttacttcgat
gtcatgaccagagaagtcggtaccgtcgcccacagtctcgatccgcacaccgccatccag
ctctcgctcgcacccgatgtaccggaacacctgatcgtgccactcagccacaaactcaac
gccctgaaccaccaactgccaaccccgacaacggtgaagcaggaactgctcgacaacatc
gagcccatcccccacctgacccttggcagcctcgaattcagcgcctacatgcccaagacc
ggacgcatgcagcgccaaatgcaacaccgcgccgcgctctcgttcgactacgacgggttg
cgcaccagcggccccgacgacaagccgctgagccgcctggtagacagcaccagccaacgc
attcgccgccagccgcagcatgaaaaacgcctgcgcgacaccctgcgcaagctcggtttc
aagcctgccacgcgccagagcaaggcgctgcccgacagcgccggcgagatgttccaactg
cccgacgacgaaacctggctgcgttttgcccgcgaagagctgctgcgactacgcgaggca
ggctggaaggtggatgtccaccgcgacttcgccttcaacctccacgacgtggaagactgg
tacgccaacattcaggaagcccccggccacgaatggttcgacctggaactgggcatcgtc
gtcgacggccagcgccacagcctgctgccgattgtcctgcagttgctgcgcagcagcccc
gaactgctgcgccccagcgaacttgcgcggcgcggcgacgatgaacacctgttgatcgac
ctcaaccgcggccgcctggacagtccggccatgcgtgttgccttgccctacgggcggatc
aaggcagtcatgggcaccctcggcgagctgtacctgcacgaggatgccaccggcccgacg
ctgcgcatggaacgcgccgatgctgcacgccttaacgatatcgagcacctgcccctgcaa
tgggaaggtggcgaacaactgcgtaacctgggtcggcgcctgcgcgatgcgcgcgacttg
gaggtcgagccacccaagggcctggccgcgaccttgcgcccctaccagcagcagggcctg
aactggctgcaggccctgcgcgagatgggcaccggcggcatcctcggcgacgacatgggc
ctgggcaagaccctgcagacccttgcccacctgctgctggaaaaagaagccgggcgcctg
acccatcccgccctggcagtgatgcccaccagccttgtgcccaactggctggacgaagcc
cagcgcttcgcacccgacctgcgtgtcctggccctgcacggcccgggccgcacccggttc
ttcggcgcactgcacgagtacgacctgatcctgaccacgtacgccctgctgccacgcgac
ctcgagcaactgcaggcccaagcctggcacgtgctggtgctggacgaagcacagaacatc
aagagcagcaccagcaaggccgcccaggccgcccgggagctgcaggccaaccagcgcctg
tgcctgaccggcacgcccatggagaacaacctgggtgagctatggtcgatcttccacttc
ctgatgcccggctggctgggcgatcagaaacgtttcaaccaggattaccgcacccccatc
gaacgtcatggcgaccgcgagcgcctggcccacctggccagccgggtccgccctttcctg
ctgcgccgcagcaaggagcaggtggcccgcgagctgccggccaagagcgagatggttcac
tgggtggacctcagcgatgcacagcgtgacacctacgaaaccgtgcgcgtggcgatggac
aagaaggtgcgcgatgaaatcgcccgtaacggcgcctcacgcagccagatcgtcatcctc
gatgccctgctcaagcttcgccaggtgtgctgcgacctgcgcctggtcaagggcgtggaa
gccaagggcaatcaagccgacaagggcaagctgggcagcttgatggaaatgctcgaggaa
ctgctcagtgaaggccgccgagtgttgctgttctcccagttcacctcgatgctcgcactg
atcgaacaggagctggaaaagcgcgacattcgctacagcctgctgaccggcgacacccgc
gaccgccgcgcgccggttcaacagttccagagcggcgacagcgaagtgttcctgatcagc
ctcaaggccggcggtactggcctgaacctgaccgctgccgatacggtgattcactacgat
ccctggtggaacccggccagcgagaaccaggcaaccgaccgcgcctaccgcatcggtcag
gacaagccggtgttcgtctacaagctgatcacccgcggcacggtggaagaaaagatccag
cagttgcagcaagagaaagccgccctcgcggccggcctgctcgatggtgggcaggccggt
cagtggcggctcggggatgacgagatcgaagcactgttcgcgccgttgccgggcaagcga
gggcgctga
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