Pseudomonas wayambapalatensis: HU734_009355
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Entry
HU734_009355 CDS
T08016
Symbol
sucD
Name
(GenBank) succinate--CoA ligase subunit alpha
KO
K01902
succinyl-CoA synthetase alpha subunit [EC:
6.2.1.5
]
Organism
pwy
Pseudomonas wayambapalatensis
Pathway
pwy00020
Citrate cycle (TCA cycle)
pwy00640
Propanoate metabolism
pwy00660
C5-Branched dibasic acid metabolism
pwy00720
Other carbon fixation pathways
pwy01100
Metabolic pathways
pwy01110
Biosynthesis of secondary metabolites
pwy01120
Microbial metabolism in diverse environments
pwy01200
Carbon metabolism
Module
pwy_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pwy_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
pwy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
HU734_009355 (sucD)
00640 Propanoate metabolism
HU734_009355 (sucD)
00660 C5-Branched dibasic acid metabolism
HU734_009355 (sucD)
09102 Energy metabolism
00720 Other carbon fixation pathways
HU734_009355 (sucD)
Enzymes [BR:
pwy01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
HU734_009355 (sucD)
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GFIT
Motif
Pfam:
CoA_binding
Ligase_CoA
Succ_CoA_lig
CoA_binding_2
Motif
Other DBs
NCBI-ProteinID:
QXI44953
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All DBs
Position
2108954..2109838
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AA seq
294 aa
AA seq
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MSVLINKDTKVICQGFTGSQGTFHSEQAIAYGTKMVGGVTPGKGGTTHLGLPVFNTVKEA
VEATGADASVIYVPAPFCKDSILEAAFGGIKLIVCITEGIPTLDMLDAKVKCDELGVTLI
GPNCPGVITPGECKIGIMPGHIHLPGKVGIVSRSGTLTYEAVKQTTDAGFGQSTCVGIGG
DPIPGSNFIDILKLFQEDPKTEAIVMIGEIGGSAEEEAAAYIKASVTKPVVSYIAGVTAP
AGKRMGHAGAIISGGKGTADEKFAALQDAGVKTVRSLADIGKALAELTGWEAKK
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtcctgatcaataaagacaccaaagtcatctgccagggcttcaccggctcgcag
ggtactttccactccgaacaagccatcgcctacggcaccaagatggtcggcggcgtcacc
ccaggcaagggtggcaccacccacctgggcctgccggtgttcaacaccgtcaaggaagct
gtggaagctaccggcgctgacgcttcggtcatctacgttccggctccgttctgcaaggac
tcgatcctggaagcggccttcggcggcatcaagctgatcgtctgcatcaccgaaggtatt
cctaccctcgacatgctggacgccaaggtcaagtgcgacgagctgggtgtcaccctgatc
ggccctaactgcccaggcgtcatcactccgggcgagtgcaagatcggcatcatgccaggc
cacatccacttgccaggcaaggtcggtatcgtgtcgcgttccggcaccctgacctatgaa
gcggtcaagcagaccaccgacgccggtttcggccagtcgacctgtgtcggcatcggtggc
gacccgatcccaggctccaacttcatcgacatcctgaagctgttccaggaagacccgaag
accgaagcgatcgtcatgatcggtgagatcggcggttcggctgaagaagaagctgctgcc
tacatcaaggccagcgtcaccaagcctgtcgtttcctacatcgctggtgttaccgctcct
gcgggcaagcgtatgggccacgctggcgccatcatctccggcggtaaaggcactgcagac
gagaaattcgctgcactgcaggacgctggcgtgaagaccgtgcgttccctggctgacatc
ggcaaggccctggccgagctgactggctgggaagccaagaagtaa
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