Pseudomonas wayambapalatensis: HU734_012325
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Entry
HU734_012325 CDS
T08016
Name
(GenBank) ABC transporter ATP-binding protein
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
pwy
Pseudomonas wayambapalatensis
Pathway
pwy02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pwy00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HU734_012325
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pwy02000
]
HU734_012325
Transporters [BR:
pwy02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
HU734_012325
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
TOBE_2
AAA_21
DUF2158
SMC_N
AAA_29
RsgA_GTPase
MIT_C
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QXI41080
LinkDB
All DBs
Position
complement(2690913..2692061)
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AA seq
382 aa
AA seq
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MSAVIKEAAHGKTLVTLRNLNKHYGDFAAVDNISLDIQDGEFLTFLGSSGSGKSTTLSML
AGFETPSSGEILVEGRSLVNVPPHKRDIGMVFQRYSLFPHLSVRDNIAFPLAIRKLGSAE
IAKRVDAMLKLVQLETFAHRRPAQLSGGQQQRVAIARALVYEPRILLMDEPLGALDKKLR
EDLQDELRQLHRRLGITIVYVTHDQEEAMRLSQRIAIFSHGKIVGLGSGYDLYQNPPNAF
VASFLGNSNFLRVTASSHGAAAFEGQSLAIRLTSGLAADQDALIMVRPEKALALSTEQAT
REPLPAGWNEVNAKVGEVLFLGESQTCQVVTAGGTEMTVKALSAAGMPMQPGDTVKVRWV
VADACVYTEWAESDLSKAAGAH
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcagtcatcaaagaagccgcgcacggcaagaccctggtcaccctgcgcaatctg
aacaagcactacggcgacttcgccgcggtcgacaacatcagcctggacatccaggacggc
gaattcctcaccttcctcggctccagcggctcgggcaagtccaccaccctgtcgatgctg
gccggcttcgagacccccagcagcggcgagattctggtcgaaggccgctcgctggtgaac
gtgccgccgcacaagcgtgacatcggcatggtgttccagcgctactcgctgttcccgcac
ctgagcgtgcgcgataacatcgccttcccactggccatccgcaagctgggcagcgccgag
atcgccaagcgcgtcgacgccatgctcaaactggtgcagctggaaaccttcgcacaccga
cgcccggcccagctctccggcggccagcagcaacgggtggcgatcgcccgggcgctggtt
tacgagccgcgcatcctgctgatggacgagcccctcggtgccctggacaaaaagctgcgc
gaagacctgcaggacgagttgcgccagttgcaccggcgcctgggcatcaccatcgtctac
gtcactcatgaccaggaagaagcgatgcgcctgtcccagcgcatcgctatcttcagccac
ggcaagatcgtcggcctgggcagcggttacgacctctaccagaacccacccaacgccttc
gtcgcctcgttcctgggtaactccaacttcctcagggtcaccgccagcagccatggcgcg
gcggcgttcgagggccagtcgctggccattcgcctgacctcagggctggccgcggatcag
gatgcactgatcatggtccgcccggaaaaggccctggcgctgagcaccgagcaggcgacc
cgcgagccgctgcccgctggctggaacgaggtgaacgccaaggtcggcgaagtcttgttc
cttggcgaaagccagacctgccaagtggtgacggcaggcggtacagaaatgacggtcaag
gcgctgtcggcggcgggcatgccgatgcagccgggcgatacggtcaaggtacgctgggtg
gtggccgatgcctgcgtgtacaccgagtgggccgagagtgacctgagcaaggctgccggc
gcacactga
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