Pseudomonas wayambapalatensis: HU734_015225
Help
Entry
HU734_015225 CDS
T08016
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
pwy
Pseudomonas wayambapalatensis
Pathway
pwy00550
Peptidoglycan biosynthesis
pwy01100
Metabolic pathways
pwy01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
pwy00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
HU734_015225 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
HU734_015225 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pwy01011
]
HU734_015225 (mrdA)
Enzymes [BR:
pwy01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
HU734_015225 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
pwy01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
HU734_015225 (mrdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
QXI41634
LinkDB
All DBs
Position
3355226..3357121
Genome browser
AA seq
631 aa
AA seq
DB search
MPQPIPLKDHEKEKHLVNRRLLVCAALTLGLVAVLIGRLYVLQVLQHDQQSAVSENNRVH
VLPIAPERGLIYDRNGVVLADNKPSFNLTMTRERTNGQTSAVLDALAKVLNLSDDDRAQF
DKDLRRGRKPFEPVTLMFGLSEEQIALIAVNQFRLPGLDVEPQFIREYPLAEHFAHSVGY
VGRINEKEAKTLDSTEYRGTQSIGKTGVERFYENELHGHVGYEEVETNAQGRVMRVLRHH
DPVPGKDIVLSLDAKLQQAAEKALGDRRGAVVALDPATGDVLAMVSNPSFDPNLFVKGIS
FKQYAALRDSIDRPLFNRVLRGLYAPGSTVKPEVAIAGLDSGVINPGSRVFDPGYYELPN
YDHKYRNWNRSGDGWVDMYTAIMRSNDTYFYDLAHKLGIDRLHDYMAEFGLGQKVSLDMF
EEAPGLMPSAQWKRATRRQAWFPGETLILGIGQGYMQVTPLQLAQATSLLASKGVWHRPH
LAMTVGGEHPVDPNPMPDIVLHDKRAWDQVSQGMQMVMHDPRGIARAAAAGAQYRIAGKS
GTAQVVAIRQGERYNRDKTLERHRDNALFVGFAPAEHPSIVVAVMIENGEAGGRVAGPVV
REIMDAWLLDDQGHLKEQYAGSAGKSAVPHG
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgccacagccgattcccctcaaggaccacgaaaaggaaaagcacctggtcaaccgccgg
ctgctggtctgcgccgcgctgaccctgggcctggtcgcggtgctgatcggcaggctgtat
gtcttgcaggtgctgcagcacgaccagcaatcggcggtttcggaaaacaaccgcgtgcac
gtgctgcccatcgcccccgagcgcgggttgatctacgaccgtaacggcgtggtgctggcc
gacaacaagcccagcttcaacctcaccatgacccgcgagcgcaccaacggccagacctcc
gccgtgctcgacgccctggccaaggtcctgaacctctccgacgacgaccgcgcccagttc
gacaaagacctgcgccgcggccgcaagcccttcgaaccggtcaccctgatgttcggcctg
agcgaagagcagatcgcgctgatcgcggtcaatcagttccgtctgcccggcctggacgtc
gagccgcagttcatccgcgaatacccgctggccgagcatttcgcccattcggtcggctac
gtcgggcggatcaacgaaaaggaagccaagaccctcgacagcaccgagtaccgcggcacc
cagtcgatcggcaagaccggcgtcgagcgcttctacgagaacgagctgcacggccatgtg
ggctacgaggaagtcgagaccaatgcccaggggcgggtcatgcgcgtgctgcgccatcac
gatccggtgccgggcaaggatatcgtcctgagcctggacgccaaactgcagcaggccgcc
gaaaaggccctgggcgatcgccgtggtgcggtggtggcgctggatccagccacgggcgac
gtgctggcgatggtcagcaaccccagcttcgaccccaacctgttcgtcaagggcatcagc
ttcaagcaatacgccgcgctgcgcgactcgatcgaccgcccgctgttcaaccgcgtgctg
cgcgggttgtacgcgcccggttcgacggtcaagccggaagtggccatcgccggcctggac
agcggcgtgatcaacccgggtagccgcgtgttcgaccccggttactacgagctgcccaac
tacgaccacaagtaccgcaactggaaccgcagcggcgatggctgggtggacatgtacacc
gccatcatgcgttccaacgacacctacttctacgacctggcgcacaagctgggcatcgat
cgcctgcacgactacatggccgaattcggcctgggccagaaggtctcgctggacatgttc
gaggaagcgcccggcctgatgccgtccgcacaatggaaacgcgccacccgccgccaggcc
tggttccccggcgaaaccctgatccttggcatcggccagggctatatgcaggtcaccccg
ctgcaactggcgcaggccaccagcctgctggccagcaagggggtgtggcaccgtccgcac
ctggccatgaccgtgggtggcgagcacccggtcgacccgaacccgatgcccgacatcgtg
ctgcatgacaaacgcgcctgggaccaggtcagccagggcatgcagatggtcatgcatgat
ccgcgcggcatcgcccgtgcggccgccgctggcgcgcagtaccggattgccggcaagagc
ggcaccgcgcaggtcgtggcgatccgccagggcgagcgctacaaccgcgacaagaccctg
gagcggcaccgcgacaacgccctgttcgtgggcttcgcccccgccgagcatccctccatc
gtggtggcggtgatgatcgagaacggcgaggctggcggccgggtggccgggcccgtggtg
cgcgagatcatggatgcctggttgctggatgaccaggggcacctgaaggaacagtacgcc
gggagcgcgggcaagagcgcggtgccgcacggctga
DBGET
integrated database retrieval system
