Pseudomonas wayambapalatensis: HU734_017155
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Entry
HU734_017155 CDS
T08016
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
pwy
Pseudomonas wayambapalatensis
Brite
KEGG Orthology (KO) [BR:
pwy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pwy03000
]
HU734_017155
Transcription factors [BR:
pwy03000
]
Prokaryotic type
Helix-turn-helix
Other families
HU734_017155
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_lid_14
HTH_8
AAA_5
PAS_4
HTH_30
AAA_2
HTH_7
HTH_22
AAA_7
HTH_23
HTH_29
HTH_10
HTH_26
Phage_CP76
AAA_3
Mg_chelatase
DUF2089
MCM
HTH_28
TrmB
AAA
PAS_7
Motif
Other DBs
NCBI-ProteinID:
QXI41987
LinkDB
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Position
3847586..3849349
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AA seq
587 aa
AA seq
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MAADTPTHAHLIQASWARCREYGLQPHSAPDFDCLTGAQLNELLEHRQALLQLTRDAVLP
QYTHLLGNSSYLVMLADAGGCLLDAWGTRRFVEPRQQHGFTPGAHWQERGVGTNALGTAL
ACGEAIHVGQDEHFLRQNRYMASAAAPLFDAERRLVGVLDVSSDGYLPVAQTLGLVRMMG
QSLENRLILAAHSDRHGQLLFNTAPDNLDSPWAGLLLFDEHGRVLAANHRADSLLGQDPR
QCTLEQLFQTSLKQILAHPQESAFALQVAGRHRFHCQWRAPHQPVRSTPPSSDPRVSKAL
AQAGLLLEKDIPVLIQGETGVGKEVFVNALHQASSRADQPLIAVNCAAIPAELVESELFG
YEKGAFTGAHHKGNTGLIRKADGGILFLDEIGDMPLPTQARLLRVLQSRCIQPLGSGEPV
AVDIRVVSASNLDLAAEVRAGRFRQDLYYRIAGLTLALPPLRERSDRRALIEQVHARYRE
PGQVQRLSPRILALLEQHPWPGNLRELVTVMQVALALAGPDAIGEEHLPAAFLAEAATPL
PTPERSDTGQDLNALLHEANGNLSSVARALGISRTTLYKRLRSTAAG
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atggccgctgacaccccgacccacgcccacctgatccaggcctcctgggcccgctgccgc
gaatacggcctgcaaccgcacagcgcgccggatttcgactgcctgaccggcgcacaactg
aacgaactgctcgagcatcgtcaggccctgctgcaactgacccgcgacgcagtactgccg
cagtacacacacctgctgggcaactccagctacctggtgatgctcgccgatgccggcggc
tgcctgctcgatgcctgggggacgcggcgcttcgtcgagccgcgccagcagcacggtttc
accccaggcgcgcactggcaggaacgcggcgtgggcaccaatgcgctgggcacggcattg
gcctgcggtgaggccatccacgtcggccaggacgaacatttcctgcgccagaaccgctac
atggccagcgccgccgcgcccttgttcgatgccgagcgtcggctggtgggcgtactggat
gtctcaagcgatggctacctgcccgtcgcccagaccctcggcctggtgcgcatgatgggc
cagagcttggagaatcgcctgattctcgccgcccacagcgaccggcacgggcaactgctg
ttcaataccgcacccgacaacctcgacagcccctgggccggcttgctgctgttcgacgag
catgggcgagtgctggccgccaatcatcgcgccgacagcctgctgggccaggatccgcgg
cagtgcacgctcgaacagctgttccagacctcgctgaaacagattctcgcccaccctcag
gaaagcgccttcgccctgcaggtcgccggtcgccaccgtttccactgccagtggcgcgca
ccgcatcaacctgtgcgcagcacacccccgagcagcgaccctcgcgtgagcaaggcgctg
gcccaggccggcctgctgctggaaaaggatattccagtgctgatccagggcgagacaggc
gttggcaaggaagtcttcgtcaatgccctgcaccaggccagcagccgcgccgaccaacca
ctgatcgcggtgaactgcgcggcgatcccggcagaactggtggagtcggaattgttcggc
tacgagaaaggcgccttcaccggtgcccaccacaaaggcaacaccgggctgatccgcaag
gctgacggcggcattctgtttctcgacgaaattggcgacatgcccctgccaacccaagcc
cgcctgttgcgcgtactgcagtcgcgctgcatccagccgctgggcagcggtgagccggtg
gcggtggacattcgcgtggtctcggcgagcaacctggacctggctgccgaagtccgggcc
gggcgttttcgccaagacctctactaccgcatcgccgggctgacactggcactgcccccg
ctacgcgagcgcagcgatcggcgggcgctgatcgagcaggtgcatgcgcgttaccgcgaa
cccgggcaggtacaacgcttgtcgccgcggatactggcgctgctcgaacagcatccctgg
ccgggaaacctgcgcgagctggtgaccgtgatgcaggttgccctggcgttggccgggcct
gatgccatcggcgaggagcacctgccagcggcgtttctggcggaagctgcgacgcccctg
cccacacctgaacggtccgacaccgggcaagacctcaacgccctgctgcacgaagccaac
ggtaatctttcatcggtggcgcgggcgctggggatcagccgcacgacgctgtacaagcgg
ctgcgctcgacggccgcaggctga
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