Pseudomonas wayambapalatensis: HU734_017480
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Entry
HU734_017480 CDS
T08016
Symbol
dacB
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase
KO
K07259
serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:
3.4.16.4
3.4.21.-]
Organism
pwy
Pseudomonas wayambapalatensis
Pathway
pwy00550
Peptidoglycan biosynthesis
pwy01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pwy00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
HU734_017480 (dacB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pwy01002
]
HU734_017480 (dacB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pwy01011
]
HU734_017480 (dacB)
Enzymes [BR:
pwy01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
HU734_017480 (dacB)
Peptidases and inhibitors [BR:
pwy01002
]
Serine peptidases
Family S13: D-Ala-D-Ala peptidase C family
HU734_017480 (dacB)
Peptidoglycan biosynthesis and degradation proteins [BR:
pwy01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
HU734_017480 (dacB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_S13
Beta-lactamase2
Motif
Other DBs
NCBI-ProteinID:
QXI42045
LinkDB
All DBs
Position
3916832..3918295
Genome browser
AA seq
487 aa
AA seq
DB search
MIKTLRPLLFAGLLLPIALPSQAAAVNTSLPPKVQQALKTNKLQDNALSLVMLPLDGPGT
PTIFNADVSVNPASTMKLVTTYAALELLGPTFQWKTEFYTDGTLNNGVLNGNLYLKGGGD
PKLNMEKLWLLMRDLRANGVRTVTGDLVLDRSHFVQPTLPHFDDDGGDVNKPFLVKPDSL
LVNLKALRFVARNDGGKVVVSVEPPIASIRIDNQVKAMASKQCTGDVRYNPVVQPDGVSV
TVSGQLGDGCNSQTYLALLDHPAYAAGAVRAIWNELGGSIQGRDRIENVPKSARLLARAF
SPDLVEVIRDINKYSNNTMAQQLFLSLGAQFRTDADGDDARAAQRVVRQWLAKKGITAPH
LVMENGSGLSRAERVSTREMAALLQAAWKSPYAAEFISSMPLVGMDGTMRKRLKRTAMTG
EAHIKTGTLNTVRAIAGFSRDSNGHTWAVSAILNDPKPWGASQVLDQVLLELYRQPKVGT
GTVGVVP
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgatcaagacgcttcgcccactgcttttcgccggcctgctccttcccatcgccttgccc
agccaggctgccgccgtcaacaccagcctgccaccgaaagtgcagcaggccctcaagacc
aacaagctgcaggacaacgccctgtcgctggtgatgctgccactcgatggaccaggcacg
ccgacgatcttcaatgccgacgtctcggtcaacccggcctcgaccatgaagctggtgacc
acctacgccgccctcgaattgcttggcccgacctttcagtggaagaccgagttctacacc
gacggcaccctgaacaacggcgtgctcaacggcaacctctacctcaagggtggcggtgat
ccgaaactgaacatggaaaagctctggttgctgatgcgtgatctacgcgccaacggtgtg
cgcaccgtcaccggcgacctggtgctggaccgcagtcatttcgttcaacccaccctgcca
catttcgacgatgatggcggcgatgtcaacaagcccttcctggtcaaaccggactcgctg
ctggtcaacctcaaagccctgcgtttcgtcgcccgcaacgatggtggcaaagtcgtggtt
tcggtcgagccgcccatcgccagcatccgcatcgacaatcaggtcaaggccatggcctcg
aagcaatgcaccggcgatgtgcgctacaaccccgtggtgcaacccgatggcgtgagcgtc
acggtcagtggccagctcggcgacggctgcaactcgcaaacctatctggccctgctcgac
caccccgcctatgcggccggtgcggtcagggcgatctggaacgagctcggcggcagcatc
cagggccgtgaccgcatcgaaaacgtacccaagagcgcgcgcctgttggcccgggccttc
tcgcccgacctggtcgaggtgattcgcgatatcaacaaatacagcaacaacaccatggcc
cagcaactgttcctcagcctgggcgcgcaatttcgcaccgatgccgacggtgacgatgcc
cgcgcggcacagcgtgtcgtgcgccagtggctggccaagaaaggtatcaccgcaccgcac
ctggtgatggagaacggctctggcctgtcacgcgccgagcgtgtcagcacacgtgaaatg
gcggccttgctgcaagccgcctggaagagcccctatgcggccgagttcatcagttcgatg
ccattggtgggcatggatggcaccatgcgcaagcgcctgaagcgcaccgccatgaccggc
gaggcgcacatcaagaccggcaccctcaacaccgtgcgcgcgatcgcaggcttcagtcgc
gacagcaacggccatacctgggccgtgtcggcgattctcaatgatccgaaaccttggggc
gcctcccaggtgctggatcaggtgttgctggagctctaccgccaacccaaggtcggcacc
gggactgtcggcgtggtgccctga
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