Pseudomonas wayambapalatensis: HU734_017845
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Entry
HU734_017845 CDS
T08016
Name
(GenBank) exonuclease SbcCD subunit D C-terminal domain-containing protein
KO
K03547
DNA repair protein SbcD/Mre11
Organism
pwy
Pseudomonas wayambapalatensis
Brite
KEGG Orthology (KO) [BR:
pwy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pwy03400
]
HU734_017845
DNA repair and recombination proteins [BR:
pwy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HU734_017845
Archaeal homologous recombinant proteins
HU734_017845
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
QXI42114
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All DBs
Position
4015460..4016695
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AA seq
411 aa
AA seq
DB search
MRLFHTSDWHLGQSLHGQERDFEHACFLDWLLGQLRLRQPDALLIAGDIFDTVNPPVKAQ
ERLYDFIVQAHEQQPKLDIVMIAGNHDSGSRIELPAALMRRLRTHALGRVHWLDEGQLDA
ERLLIPLTNARGKVCAWCLALPFLRPAEVTGPQLGDDYLQGITQVHQQLIAAALGKRKKD
QALIAISHAHMAGGSISEDSERSLIIGNAEALPARLFDKAISYVALGHLHKPQKVNRENR
IRYSGAPIPLSFAEINYPHQVLEIELDGTELLSVEPRLVPRAVALQRMGPAPVGELLEQL
ADLPVIDLLEDPNRQPWLEVRVRLDEPQPDLRQQIESALQGKAVRLVRISAEYAGRNAQD
EDEQAFVELSQMTPQDLFGRAWEQAYGSPVDEQTLSDFALLLQDVQLEEQP
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctgtttcacacctccgactggcacctgggccagagcctccacggccaggaacgc
gacttcgaacacgcctgcttcctcgactggctgctcggccagctacgcctgcgccaaccc
gacgcgctgctgatcgccggggatatcttcgacacggtcaacccaccggtcaaagcccag
gagcgcctctacgacttcatcgtccaggcccacgaacagcagcccaagctggacatcgtg
atgatcgccggcaaccacgactccggctcgcgcatcgaattgcccgccgccctgatgcgc
cgcctgcgcacccacgccctgggccgggtgcactggctggacgaaggccagctcgacgcc
gagcgcctgctgatcccgctgaccaacgcccgcggcaaggtctgtgcctggtgcctggcc
ctgcccttcctgcgcccggcagaagtcaccggtccgcaactgggcgatgactacctgcag
ggcatcacccaggtgcaccagcaactgatcgccgccgcccttggcaagcgcaagaaggac
caggcactgatcgccatcagccacgcccacatggccggtggctcgatttccgaagactcc
gagcgcagcctgatcatcggcaacgccgaagccctgccggcgcggttgttcgacaaggcc
atcagctatgtcgccctgggccacctgcacaagccccagaaggtcaaccgggagaaccgc
atccgctacagcggcgcgcctatcccgctgtcgttcgccgagatcaactatccgcaccag
gtactggagatcgagttggacggcaccgagctgctcagcgtcgaaccgcgcctggtacct
cgggccgtggccttgcagcgcatgggcccggcaccggtcggcgaactgctcgagcagctt
gccgacctgccagtgatcgaccttctcgaagaccccaatcgccagccatggctggaagtg
cgggtacgcctggacgagccgcagcccgacctgcgccagcagatagaaagcgcactgcag
ggcaaggcggtgcgcctggtgcgcatcagcgccgaatatgccgggcgcaacgctcaggac
gaggacgaacaggccttcgtcgagctgtcgcagatgaccccgcaggacctgttcggccgc
gcctgggagcaggcctacggcagccccgtcgatgaacagaccctgagcgacttcgccctg
ctgctgcaggacgtgcaactggaggagcagccatga
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