Pseudomonas wayambapalatensis: HU734_017850
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Entry
HU734_017850 CDS
T08016
Name
(GenBank) AAA family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
pwy
Pseudomonas wayambapalatensis
Brite
KEGG Orthology (KO) [BR:
pwy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pwy03400
]
HU734_017850
DNA repair and recombination proteins [BR:
pwy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HU734_017850
Archaeal homologous recombinant proteins
HU734_017850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_21
AAA_29
SMC_N
nSTAND3
ABC_tran
RsgA_GTPase
MMR_HSR1
AAA_22
AAA_15
Motif
Other DBs
NCBI-ProteinID:
QXI42115
LinkDB
All DBs
Position
4016692..4020336
Genome browser
AA seq
1214 aa
AA seq
DB search
MKILAIRLKNLASLAGPIDIDFTAEPLASAGLFAITGPTGAGKSTLLDALCLALFGTVPR
LNEIGREAKVPDADGEIPTSDPRNLLRRGTGSGFAEVDFVGIDGKRYRARWEANRARDKA
NGKLQHSRQSFYDLDGEQLLASGKNEYKQLAEARLGLNFEQFTRAVMLAQSEFGAFLKAD
DRERSELLEKLTNTAIYTRLGQRAFTRSREAAEALKALEERASHLLPLAAEARAELDQRL
EQAQQHFKAEQARERQLEQQCIWLSEQQRLLAQHAEASEALKAAEHTSAQLSEQRIDLQR
LERLAPQRHQFHRQLTLAAQLTPLAAEIAEQVRQQTELHTRIGELEQAQLSARDALAQSQ
AQHSENAPRLRQAFAAQDGLARLDQDLAKQHSACQQAEQDLAESQQHLQQLEQNQQRSLE
QLALIDTALADSQHLAGLANAWQAYLPQLKQVMLIGSRLAKGREELPGLQAQASQANTQL
QTQRDSFELLFREAKAEPQALAEQIDLLGGMLQDNRKQQRAVEELSRLHGREMELRQQLD
ALRERQQQAMQQRQQLIGEGTSAKARLETAEQALALTRQLLDRQRLARNTSVEELRGQLR
DGEPCPVCGSAEHPFHQPEALLQSLGRHDQAEEEAAQKQVETLNGQLVELRTQLGVVNAQ
LKDFQQQQQQLGEQLQPLVAQVQAHSLWPALAPQDDKARSVWLDSQLRRLDEEIGKDEKR
QSALLALQKDAARLTQQLQAAQEAQQQAQRHLDQQHQALANDEQQLEQGLKDLASVLPGD
VLKALSDDPTHAFVALDQQISQRLQQLERRKDEQEEQQARQLQLDKLRDQHQARLDTQEQ
LRQQLAALETQRQQAQAALAELLGEQPSAEAWQQHMDAQLEQARALDADTAQHLQTLRTQ
GVQLASELKANGNRQQALEQEHQQLHGDIAQWRAEHPELDDVGLERLLAIDEAAVSALRQ
HLQDADKAVEQAQVLLHEREQRLQQHSAESAVQASAQDLQQSLGELREQLAIHEQHCAEL
RAQQADDQRRQQAHQALAEDIDKARGERQRWGRLNDLIGSASGDVFRKIAQGYNLDLLLH
HANNQLRQLARRYRLKRGGSALGLLVLDTEMGDELRSVHSLSGGETFLVSLALALGLASM
ASSTLRIESLFIDEGFGSLDPESLQLAMDALDGLQAQGRKVAVISHVQEMHERIPVQIQV
RRQGNGLSDVEVCG
NT seq
3645 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcctggccatccgcctgaagaaccttgcctccctggccggtcccatcgatatc
gacttcactgccgagcccttggccagcgccgggttgttcgccatcaccggcccgaccggc
gcaggcaagagcaccctgctcgacgccctgtgcctggcgctgttcggcacggtgccacgt
ctgaacgagatcggccgcgaagccaaggtgccggacgccgacggcgaaatccccacctcc
gatccgcgcaacctgctgcgccggggcaccggcagcggctttgccgaggtagatttcgtc
ggcatcgatggcaagcgctaccgcgcccgctgggaggccaaccgcgcgcgtgacaaggcc
aacggcaaattgcaacacagccgccagagcttctacgacctggacggcgaacaactgctg
gccagtggcaagaacgaatacaagcaactggccgaagcccgcctggggctgaatttcgag
cagttcacccgtgcggtgatgctggcccagagcgagtttggagccttcctcaaggcggac
gatcgcgaacgtagcgaactgctggaaaagctcaccaacacggccatctatacccgcctg
gggcagcgcgccttcacccgctcgcgcgaggccgccgaggcgctcaaggcacttgaggag
cgcgccagccacttgctgccgctggccgctgaggcccgtgccgaacttgaccagcgcctg
gagcaggcgcaacagcacttcaaggccgaacaggcgcgcgagcggcagcttgaacaacag
tgcatctggctcagcgaacagcagcgcctgctggcccaacacgccgaagccagtgaagcg
ctcaaggccgccgagcacaccagcgcccagctcagcgagcagcgtatcgatttgcaacgc
ctggagcgcctggccccccagcgccatcagttccaccgccagttgaccctggccgcccag
ctcacaccgctggccgccgaaatcgccgagcaggtacgccagcagaccgaactgcacacc
cgtatcggcgaactggagcaggcgcagctcagcgcacgcgatgcgctcgcacaaagccag
gcgcagcacagcgagaacgccccccgcctgcggcaggcctttgccgcccaggacggcctc
gcccgcctcgaccaggacctggcgaaacagcactcggcctgccagcaggctgagcaggac
cttgccgaaagccagcagcacctgcagcagctggaacagaaccagcagcgcagcctggaa
caactggccctgatcgacaccgcactggccgacagccaacacctggcgggcctggccaat
gcctggcaggcctacctcccgcaactcaagcaggtgatgctgatcggcagccgcctggcc
aagggtcgcgaagaactgccaggcttgcaggcacaggccagccaggccaatacccaactg
caaacccagcgcgacagcttcgagttgctgttccgcgaagccaaggccgagccccaggcc
ctggccgaacagatcgacctgctcggcggcatgctgcaggacaaccgcaagcagcagcgc
gcagtcgaggaactgtcgcgcctgcacggtcgcgagatggaactgcgccagcagctcgac
gccctgcgtgagcggcagcaacaggccatgcagcagcgccagcaactgatcggcgaaggc
acatcggccaaggccaggctggaaacggcagaacaggcactcgccctcacccgccagttg
ctcgatcgccaacgcctggcgcgcaacaccagcgtcgaagaattgcgcggccaactgcgc
gacggcgaaccctgcccggtctgcggcagcgccgagcatccgttccaccagcccgaagcg
ctgctgcagagccttggccgccatgaccaggccgaagaagaagccgcgcagaaacaggtc
gagaccctcaacggccaactggtggaactgcgcacccaattgggcgtggtcaacgcccag
ctcaaggatttccagcagcagcaacagcaactcggcgaacagttgcaacccttggtggca
caggtgcaggcccacagtctatggccagccctggcaccacaggacgacaaggcacgcagc
gtctggctcgacagccagctgcggcgcctggacgaggaaatcggcaaggacgagaaacgc
cagagcgccctgctcgccctgcagaaggacgccgcgcgcctcacccagcagttgcaggcg
gcacaagaagcccagcaacaggcccagcgccatctggaccaacaacaccaagccttggcc
aacgacgagcagcaactggagcaagggctgaaggacctcgccagcgtgctgccgggcgac
gtgctcaaggccctgagcgacgatccgacccacgctttcgtcgccctcgaccagcagatc
agccagcgcctgcagcagctcgaacggcgcaaggacgaacaggaagaacagcaggcgcgc
caactccagttggacaagctgcgcgatcagcatcaagcacggctggacacccaggagcaa
ctgcgccagcaactcgccgccctcgagacccagcgacagcaggcccaggccgcgctggcc
gagttgctcggcgaacagcccagcgccgaagcctggcaacagcatatggatgcgcaactg
gagcaggcacgggcgctcgacgccgataccgcacaacacctgcagacgctgcgcacccaa
ggcgtgcagttggccagtgagctcaaggccaacggcaatcgccagcaggcactggaacag
gaacaccagcaactgcacggcgacatcgcccaatggcgcgccgaacaccctgaactggac
gacgtcggcctggagcgcctgctggccatcgatgaggccgccgtcagcgcgctgcgccag
cacctgcaagatgccgacaaggccgtcgagcaagcgcaggtgctgttgcacgagcgcgaa
cagcgtctgcaacagcacagcgccgagtccgccgtccaggcttcggcccaagacctgcag
cagagccttggcgaactgcgcgagcaactggccatccacgaacagcactgcgccgagctg
cgtgcccagcaggccgacgaccagcgccgccaacaggcgcaccaggcactcgccgaggac
atcgacaaggcccgtggcgagcgccagcgctggggtcggctcaatgacctgatcggctcg
gcctcaggcgatgtgttccgcaagatcgcccaaggctacaacctcgacctgctactgcac
cacgccaacaaccagttgcgccagctggcccggcgctaccgcctcaaacgcggcggcagc
gccctcggcctgctggtgctggataccgagatgggcgatgaactgcgctcggtgcactcg
ctgtcgggcggcgagaccttcctggtctcgctggcactggccttggggctggcatcgatg
gcctccagcaccctgcgcatcgaatcgcttttcatcgacgaaggcttcggcagcctggac
cccgagtcactgcaactggccatggatgcgctcgacggcctgcaggcccagggtcgcaag
gtcgcggtgatttcccacgtgcaggaaatgcatgagcgtattccggtacagatccaggtg
cgtcgccagggcaacggcctgagcgatgtcgaggtctgcgggtga
DBGET
integrated database retrieval system