Pseudomonas wayambapalatensis: HU734_018960
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Entry
HU734_018960 CDS
T08016
Name
(GenBank) PLP-dependent aspartate aminotransferase family protein
KO
K01758
cystathionine gamma-lyase [EC:
4.4.1.1
]
Organism
pwy
Pseudomonas wayambapalatensis
Pathway
pwy00260
Glycine, serine and threonine metabolism
pwy00270
Cysteine and methionine metabolism
pwy00450
Selenocompound metabolism
pwy00670
One carbon pool by folate
pwy01100
Metabolic pathways
pwy01110
Biosynthesis of secondary metabolites
pwy01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
pwy00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
HU734_018960
00270 Cysteine and methionine metabolism
HU734_018960
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
HU734_018960
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
HU734_018960
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pwy04147
]
HU734_018960
Enzymes [BR:
pwy01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.1 cystathionine gamma-lyase
HU734_018960
Exosome [BR:
pwy04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
HU734_018960
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cys_Met_Meta_PP
Aminotran_1_2
Met_gamma_lyase
Aminotran_5
DegT_DnrJ_EryC1
Spatacsin_C
Motif
Other DBs
NCBI-ProteinID:
QXI42314
LinkDB
All DBs
Position
complement(4267201..4268370)
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AA seq
389 aa
AA seq
DB search
MAEKPRNFATRTIHAGEQSSVADNAIFPAIVTSSSFIKRGLDDNPEYAYSRVSNPTRHAY
ETCVAALEEGVGAVACASGVSATATVLELLPKDAHVVVMNGVYGGTFRLMEDYRAHTCGL
TTTYVDLNDLDAVAAAIRPNTKMIWLESPTNPLLHLVDIKPLCDLARERGILTCIDNTFC
SPWNQQPITLGVDLVMHSASKYIGGHSDLTGGVVVAGNPELLARLRKISMAVGAIQGPFD
CYLALRGLKTLDVRMERQSANALRVAQYLEQHPQVEQVFYPGLASHPQHALCQRQMRTGG
AVVAVRVKGDRAAVNRLVEALSIFVLADSLGGVESMINHSWTMSHNSLSPEQKGVMGISE
NLVRLSMGIEDYRDLIDDLEAGLRAAATA
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atggccgaaaaaccgcgcaatttcgccacccgcaccatccacgccggcgagcagtccagc
gttgccgacaacgctatcttcccggccatcgtcacctccagctcgttcatcaagcgcggc
ctggacgataaccccgaatacgcttacagccgcgtcagcaacccgacccggcacgcttat
gaaacctgcgtcgcagccctggaagagggtgtcggtgcggtcgcttgtgcgtcgggcgtg
agcgccactgccacggtgctcgagctgctgcccaaggatgcccatgtggtggtgatgaat
ggcgtctatggcggcaccttccgcctgatggaggactaccgggcacacacctgcggcctg
accaccacctacgtcgacctcaacgacctggacgccgtcgccgcagcgatccgcccgaat
acgaagatgatctggctggagtcgccgaccaacccgctgctgcacctggtggacatcaag
ccgctgtgcgacctggcccgcgagcgcggcatcctcacctgcatcgacaacaccttctgc
tcgccgtggaaccagcaaccgatcaccctgggggtggacctggtgatgcactcggcgagc
aagtacatcggcggccattccgacctgactggcggggtggtggtggcgggcaatcctgaa
ctgctggcgcgcctgcgcaaaatcagcatggcggtgggcgcgatccagggcccgttcgac
tgctacctggccctgcgcggtctgaagaccctcgatgtgcgcatggagcgccagagtgcc
aacgccctgcgtgtggcgcagtacctggagcagcacccgcaggtcgagcaggtcttctac
ccaggccttgcgagccatccgcagcatgcgctgtgccagcgccagatgcgcactggcggg
gcggtggtggcagtgcgtgtgaagggtgaccgtgccgcggtcaatcgcctggtcgaagcg
ttgtcgatctttgtcctggctgactcgctgggcggtgtggagagcatgatcaaccattcc
tggacgatgtcgcacaactcgctcagtccggagcagaagggcgtgatgggtatcagcgag
aacctggtgcggttgtcgatggggatcgaggattaccgcgacctgatcgatgaccttgaa
gcggggttgcgggcggccgcgacggcgtag
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