Pseudomonas wayambapalatensis: HU734_019525
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Entry
HU734_019525 CDS
T08016
Symbol
rapA
Name
(GenBank) RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
pwy
Pseudomonas wayambapalatensis
Brite
KEGG Orthology (KO) [BR:
pwy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pwy03021
]
HU734_019525 (rapA)
Transcription machinery [BR:
pwy03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
HU734_019525 (rapA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RapA_C
Tudor_RapA
Tudor_1_RapA
Helicase_C
SNF2-rel_dom
ResIII
DEAD
Cas3-like_C_2
DUF6231
Motif
Other DBs
NCBI-ProteinID:
QXI42418
LinkDB
All DBs
Position
4386956..4389802
Genome browser
AA seq
948 aa
AA seq
DB search
MAQQYQPGQRWISDSEAELGLGTILAQDGRLLTVLYPATGDTRQYSLRNAPLTRVRFSPG
DQITHFDGWKLTVREVEDVDGLLVYHGLDGQNEARTLPETQLSNFIQFRLASDRLFAGQI
DPLSWFSLRYNTLQHSSKQMLSTLWGLGGCRAQPIAHQLHIAREVADRIAPRVLLADEVG
LGKTIEAGLVIHRQLLTGRASRVLILVPENLQHQWLVEMRRRFNLQVALFDAERFIESDA
SNPFEDAQLALVALEWLVDDEKAQDALFAAGWDLMVVDEAHHLVWHEEQASAEYALVEQL
AQVIAGVLLLTATPEQLGQDSHFARLRLLDPNRFHDLAAFRAESEHYRPVAEAVQELLDE
GRLSPKAHATIHNFLGAEGEALLAAVSDGDSQASARLIRELLDRHGTGRVLFRNTRAAIQ
GFPERQLHPYPLANPEPYSALPAGERAELYPEVAFQAQGEVSDDERWWRFDPRVDWLIDT
LKMLKRTKVLVICAHAETAMDLEDALRVRSGIPATVFHEGMSILERDRAAAYFADEEFGA
QVLICSEIGSEGRNFQFAHHLVMFDLPAHPDLLEQRIGRLDRIGQKHTIQLHIPYLQDSP
QERLFQWYHEGLNAFLNTCPTGNALQHQFGPRLLAQLVGGDNAAWSALVAEARGERERLE
AELHSGRDRLLELNSGGAGEGEALVEAILEQDDQFALPIYMETLFDAFGIDSEDHSENAL
VLKPSEKMLDASFPLGDDEGVTITYDRGQALSREDMQFLTWEHPMVQGGMDLVLSGSMGN
TAVALIKNKALKPGTVLLELLYVSEVVAPRSLQLGRYLPSAALRCLLDTNGNDLAPRVAF
ETLNDQLESVPKASANKFIQAQRDVLAKRIAAGEAKVLPVHDERVADAQRRLAAEADEEL
ARLTALKAVNPSVRDSEIDALRKQREEGLAMLDKAALRLEAIRVLVAG
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagcagtatcaaccggggcaacgctggatcagcgacagcgaagccgagctcggc
ctgggaaccatcctggcgcaggatggccgcctgctgaccgtgctctatccggccactggc
gatacccgccagtactcgctacgcaacgcgccgctgactcgcgtgcgcttctcgccggga
gaccagatcactcacttcgatggctggaagctgaccgtgcgcgaggtcgaggatgtcgac
ggcctgctggtctaccatggcctggacgggcagaacgaggcgcgtaccctgcctgagacg
caactgtcgaacttcatccagttccgtctggccagcgaccgtctgttcgccgggcagatc
gacccgctgtcgtggttctcgctgcgctacaacacgctgcagcacagcagcaagcagatg
ctctccacgctctggggcctgggcggctgccgcgcccagccgatcgcccaccagttgcac
attgcccgtgaagtcgccgaccgtatcgccccgcgggtattgctggccgacgaagtgggc
ctgggcaagaccatcgaggcgggcctggtcatccaccgccaactgctgacgggccgtgcc
agccgtgtgctgatcctggtcccggaaaaccttcagcaccagtggctggtggaaatgcgc
cggcgcttcaacctgcaggtggcactgttcgacgccgaacgcttcatcgagagcgatgcc
agcaacccgttcgaagatgcccaactggcgctggtggcgctggaatggctggtcgacgat
gaaaaggcccaggacgcactgttcgccgccggctgggacctgatggtggtcgacgaagcc
caccacctggtctggcacgaggaacaggccagcgccgaatacgcgctggtcgagcaactg
gcccaggtcattgctggcgtgctgctgctcactgccacccccgagcagctcggccaggac
agccatttcgcccgcctgcgcctgctcgaccccaaccgtttccacgacctggccgcgttc
cgcgccgagagcgagcactatcgcccggtagccgaagccgtgcaggaactgctcgacgaa
ggccgcctgtcgcccaaggcgcacgccaccattcacaatttcctcggcgccgagggcgaa
gccctgctggccgcagtcagcgatggtgacagccaggccagcgcacgcctgatccgcgaa
ttgctcgaccgccatggcaccggccgcgtgctgttccgcaacacccgcgccgcgatccag
ggcttccccgagcgccaactgcacccctacccgctcgccaaccccgagccgtacagcgcg
ctgcctgccggcgagcgtgccgagctgtacccggaagtggccttccaggcccagggcgaa
gtcagcgacgacgaacgctggtggcgcttcgacccacgggtcgactggctgatcgacacc
ctgaagatgctcaagcgcaccaaggtgctggtgatctgcgcccacgccgaaaccgccatg
gatctggaagacgctctgcgcgtgcgctccggcatccccgccacggttttccatgagggc
atgagcatcctcgagcgtgaccgcgccgctgcttatttcgccgacgaagaatttggcgcg
caggtgctgatctgctcggagatcggcagtgaaggccgcaacttccagttcgcccaccac
ctggtgatgttcgacctgccggcgcacccggacctgctcgagcaacgcatcggccgtctc
gaccggatcggtcagaaacacacgatccagctgcacatcccgtacctgcaggacagcccg
caagagcgcctgttccagtggtaccacgaaggcctgaatgccttcctcaacacctgcccg
accggtaacgccctgcagcaccagttcggcccacgcctgctggcgcaactggtcggcggc
gacaatgcggcctggagcgccctggttgccgaggcccgcggcgagcgcgagcgcctggag
gccgagctgcacagcggccgtgaccgtctgctggagctcaactccggcggcgctggcgaa
ggcgaggcactggtcgaggcgattctcgagcaagacgaccagttcgccctgcctatctat
atggaaaccctgttcgacgccttcggcatcgacagcgaagaccattcggaaaacgcgctg
gtgctcaagcccagcgagaaaatgctcgacgccagcttcccgctgggcgacgacgaaggc
gtgaccatcacctacgaccgtggccaggccctgtcgcgagaggacatgcagttcctgacc
tgggagcacccgatggtccagggcggcatggacctggtgctgtccggttcgatgggcaac
accgcggtggcgctgatcaagaacaaggcgctcaagcctggcaccgtgctgctcgaactg
ctctatgtcagcgaagtggtggcgccacgcagcctgcaactgggtcgctacctgccatcg
gccgccttgcgctgcctgctcgataccaacggcaacgacctggcgccgcgggttgccttc
gaaaccctcaacgaccagctcgagagcgtgcccaaggccagcgccaacaagttcatccag
gcccagcgcgatgtattggccaagcgcatcgccgctggcgaggcgaaggtactgccagtg
cacgacgagcgtgtcgccgacgcgcagcgccgcctggcggctgaagccgacgaagagctg
gcgcgcctgacggcgctcaaggccgtcaacccgagcgtgcgtgacagcgagatcgacgcc
ctgcgcaagcagcgcgaagaaggcctggcaatgctcgacaaggccgcactgcgtctggaa
gcgattcgcgtgctggtggccggctga
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