Pseudomonas wayambapalatensis: HU734_020640
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Entry
HU734_020640 CDS
T08016
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
pwy
Pseudomonas wayambapalatensis
Pathway
pwy03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pwy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
HU734_020640 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pwy03400
]
HU734_020640 (xseA)
Enzymes [BR:
pwy01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
HU734_020640 (xseA)
DNA repair and recombination proteins [BR:
pwy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
HU734_020640 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
Spc29
Motif
Other DBs
NCBI-ProteinID:
QXI42635
LinkDB
All DBs
Position
4630120..4631499
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AA seq
459 aa
AA seq
DB search
MIRDPFERLGLDREVLTVSQLNGRARVLLEDVFRSVWVEGEISNLARPASGHLYFTLKDS
GAQIRCALFRQNAARVRQALRDGLAVKVRGKVSLFEGRGDYQLIVDTVEPAGDGALRLAF
EALKEKLGNEGLFSAERKQPLPAHPRRIGIVTSPSGAVIRDIISVFARRAPQVELNLVPT
AVQGREAIGQIVRALQLADSLGFDALILARGGGSLEDLWCFNEEAVARAIAACVTPIVSA
VGHETDVSISDFVADVRAPTPSAAAELLAPDNSGLQQRLDSLQRRLLLRMQHRLSHDRLR
LEGLARRLRHPGERLRQQAQRLDDLDMRLRRAFMLDMSQRQQRLGRLDTRLAAQHPGRTL
KLLGQRLDSLAERLPRAMRETLKDRRQRFQAQLQTLQVVSPLATLARGYSILLDERGQAI
RSAAQTRNGQRLTARLNEGDLQVRVEDNHQTPVTLSLLD
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgatcagagaccctttcgaacgactcggcctggaccgcgaagtcctcaccgtcagccag
ctcaacggccgcgcccgtgtgctgctcgaagacgtgttccgcagtgtctgggtggaaggc
gagatatccaacctcgcccgcccggcctccggccacctgtacttcaccctcaaggacagc
ggtgcccagatccgctgtgcattgttccggcagaacgctgccagggtgcgccaggccctg
cgtgacggcctggcggtcaaggtacgcggtaaggtctcgctgttcgaggggcgcggcgat
taccagttgatcgtcgataccgtcgagcccgccggtgacggcgccttgcgcctggccttc
gaggcgctgaaggaaaagctcggcaacgaagggctgttcagtgccgaacgcaagcagccg
ctgccggctcacccgcgccgcatcggcatcgtcacctcgccaagcggcgcggtgatccgc
gacatcatcagcgtctttgcccgccgtgcaccgcaagtcgagctgaacctggtccccacg
gcagtacaaggacgcgaagccatcggccagatcgtccgcgccttgcaactggccgacagc
cttggtttcgatgcactgatcctggcccgtggcggcggctcgctggaagacctctggtgc
ttcaacgaagaagccgtcgcacgtgccatcgccgcctgcgtgacccccatcgtcagtgcg
gtgggccatgagaccgacgtgtcgatcagcgacttcgtcgccgacgtgcgcgccccaacc
ccttcggcggccgccgaattgctcgcacctgacaacagcggcctgcagcaacgcctcgac
agcctgcagcggcgcctgttactgcgcatgcagcaccgcctgagccacgatcgcctgcgc
ctggaaggcctggcccgtcgcctgcgtcaccccggcgaacgcctgcgccagcaggcccag
cgcctggatgacctggacatgcgcttgcgccgcgctttcatgctcgacatgagccagcgc
cagcagcgcctgggccgcctcgacacgcgcctggccgcgcagcatcccgggcgcaccctc
aagctgctcggacagcgcctggacagcctcgccgagcgcctgccgcgggccatgcgcgaa
acgctcaaggaccgccgccagcgcttccaggcgcaattgcagacgctgcaggtggtcagc
ccgctggccaccctggcccgcggctacagcatcctgctcgacgaacgcggccaggccatc
cgcagcgccgcccagacccgcaacggccagcgcctgaccgcgcgcctgaacgaaggcgat
ctgcaggttcgggtcgaagacaaccaccagactccggtcaccctctctctactggactga
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