Pseudomonas wayambapalatensis: HU734_021755
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Entry
HU734_021755 CDS
T08016
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
pwy
Pseudomonas wayambapalatensis
Brite
KEGG Orthology (KO) [BR:
pwy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pwy03400
]
HU734_021755 (phrB)
Enzymes [BR:
pwy01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
HU734_021755 (phrB)
DNA repair and recombination proteins [BR:
pwy03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
HU734_021755 (phrB)
Prokaryotic type
HU734_021755 (phrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
QXI42846
LinkDB
All DBs
Position
4853782..4855209
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AA seq
475 aa
AA seq
DB search
MQLIWLRSDLRINDNTALAAATAQGPTIALWIASPGQWQAHDDAPSKVDFWLRNLRDLRH
ALERLNIPLLIRHTDTWQQVPETVLKVCRTHKVQTVHWNDEYGVNESQRDRRTQSLLERS
GVTARTHLDQLFFHPGTLLTKAGHYFQVFGQFRKTCLEHLHRSLPTLAQPVKPQASLGIA
SDPIPRHIEGFDTPEQSLREHWPAGEDEAQGRLSRFVDETIDDYQTLRDLPARPGTSQLS
PYLAAGVISPRQCLHAALSSNRGEFDSGSQGVRTWIDELLWREFYKHILVGYPQVSRHRP
FRAPTEALPWRDAPDDLQAWEQGRTGFPLIDAAMRQLLHTGWMHNRLRMVVAMFLSKNLL
IDWRKGERHFMRHLIDGDLAANNGGWQWSASTGTDSVPYFRIFNPVTQSQRFDPQGRFIR
HWLPELTHLDDKCIHLPVKSSGLFDTSGYISPIVDLNSSRHRALAAFKALPASIN
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgcaattgatctggctgcgcagcgatctgcgcatcaacgacaacaccgccctcgccgcc
gccaccgcacaggggccgaccattgccctgtggatcgccagccccgggcaatggcaggcg
catgacgatgcgccgagcaaggttgacttctggctgcgcaacctgcgcgacctgcgccac
gccctcgaacgcctgaacatcccgttgctgatccgccataccgacacctggcaacaggtg
cccgaaaccgtgctcaaggtttgccgcacgcacaaggtgcagaccgtgcactggaacgac
gagtacggcgtcaacgaaagccagcgtgaccggcggacccaatccttgctggagcgctcc
ggcgtgaccgcccgcacacacctggatcagttgttcttccatcccggcaccctgctgacc
aaggcgggccactatttccaggtcttcggccagtttcgcaagacctgcctggaacatctg
catcgcagcctgccaacccttgcccagcccgtgaaaccacaggcttccctaggcatcgcc
agcgacccgatcccccggcacatagaaggcttcgacacgcccgagcagagcctgcgcgag
cactggcctgccggtgaagacgaagcccagggcaggctgtcgcgcttcgtcgacgaaacc
atcgacgactaccagaccctgcgtgacctgccggccaggcccggcaccagccagctctcg
ccctaccttgccgccggtgtgatctcgccgcgccaatgcctgcacgccgcactgtcgagc
aaccgtggcgaattcgacagcggcagccaaggtgtacgcacctggatcgacgagctgctc
tggcgcgagttctacaagcacatcctggtgggctatccacaggtctcgcgccaccgcccc
ttccgcgcccccaccgaggctctgccctggcgtgacgcgcccgacgatctccaggcgtgg
gaacaaggccgcaccggcttcccgttgatcgacgcggccatgcgccagctgctgcatacc
ggctggatgcacaataggctgcgcatggtcgtagccatgttcctgagcaagaacctgctc
atcgactggcgcaagggcgagcggcatttcatgcgacacctgatcgacggcgacctggcg
gcaaacaacggcggctggcagtggagcgcctccaccggcaccgattcggtgccctatttc
cggatcttcaacccggtgacccagtcgcagcgtttcgacccccaaggacgcttcatacgc
cattggctaccggaactcactcatctggatgacaaatgcattcatttgcctgtgaaatct
tccggactatttgatacaagtggctacatcagcccgatcgtcgatctgaacagcagccgc
catcgggcactggcagcattcaaggcgctacccgcctccatcaactga
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