KEGG   Pseudomonas wayambapalatensis: HU734_022330
Entry
HU734_022330      CDS       T08016                                 
Name
(GenBank) sigma-54 dependent transcriptional regulator
  KO
K07713  two-component system, NtrC family, response regulator HydG
Organism
pwy  Pseudomonas wayambapalatensis
Pathway
pwy02020  Two-component system
Brite
KEGG Orthology (KO) [BR:pwy00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    HU734_022330
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:pwy02022]
    HU734_022330
Two-component system [BR:pwy02022]
 NtrC family
  HydH-HydG (metal tolerance)
   HU734_022330
SSDB
Motif
Pfam: Sigma54_activat Response_reg Sigma54_activ_2 AAA_lid_14 AAA_5 AAA_2 AAA_16 Mg_chelatase AAA HTH_11 HTH_23 HTH_AsnC-type AAA_22 nSTAND3 MCM AAA_7 HTH_8
Other DBs
NCBI-ProteinID: QXI42949
LinkDB
Position
4973114..4974565
AA seq 483 aa
MPHILIVEDETIIRSALRRLLERNQYQVSEAGSVQEAQERFSIATFDLIVSDLRLPGAPG
TELIKLGQGTPVLIMTSYASLRSAVDSMKMGAVDYIAKPFDHDEMLQAVARILRDRQNAP
VATAAAAEVRSNGKAPGADKQSGASANGEIGIIGSCPPMQDLYSKIRKVAPTDSNVLIQG
ESGTGKELVARALHNLSRRAKAPMISVNCAAIPETLIESELFGHEKGAFTGASAGRAGLV
EAADGGTLFLDEIGELPLEAQARLLRVLQEGEIRRVGSVQSQKVDVRLIAATHRDLKNLA
KSGQFREDLYYRLHVIALKLPALRERGSDVNEIANAFLARQSARIGRDDLHFSSDAEQAI
RHYSWPGNVRELENAVERAVILSESPEISADLLGIDIELSGLEDDDLPDSLPMVAGVGGN
NASHEPTEDLSLEDYFQHFVLEHQDHMTETELARKLGVSRKCLWERRQRLGIPRRKSNVA
SEN
NT seq 1452 nt   +upstreamnt  +downstreamnt
atgccgcacattctgatcgtcgaagacgaaaccatcatccgttcggccctgcgtcgtctg
ctcgagcggaaccagtaccaggtcagcgaagccggctcggtgcaggaagcccaggaacgc
ttcagcattgccaccttcgacctgatcgtcagcgacctgcgcctgcccggagcaccgggc
accgagctgatcaagctcggccagggcacgccggtgctgatcatgaccagctacgccagc
ctgcgctcggcggtcgactcgatgaaaatgggcgcggtggactacatcgccaagcctttc
gaccatgacgagatgctccaggctgtcgcgcgcatcctgcgcgaccggcagaatgccccg
gtcgccactgcggccgcggccgaagtgcgcagcaacggcaaggcaccaggcgcagacaag
cagagcggcgcctcggccaacggcgaaatcggtatcattggctcctgcccccccatgcag
gacctgtacagcaagatccgcaaggtcgctccgactgactccaacgtcctgatccagggc
gaatccggcaccggcaaggagttggtcgcccgcgccctgcacaacctttcgcgacgcgcc
aaggcgccgatgatctcggtgaactgtgcggccattccggaaacgctgatcgaatccgag
ctgttcggccacgagaaaggcgcgttcaccggcgccagcgctggccgtgccggcctggtc
gaggcagcggacggcggcaccctgttcctcgacgagatcggcgaactgccgctggaggct
caggctcgactgctgcgtgtgctgcaggaaggcgagattcgtcgggtcggctcggtgcag
tcgcaaaaggtcgatgtgcgcctgatcgctgcgacccaccgcgacctgaaaaacctggcc
aagtccggccagttccgcgaagacctttattaccgtctgcacgtcatcgccctcaaactg
cccgccttgcgcgagcgcggcagcgacgtcaacgagattgccaacgccttcctcgcccgg
cagagcgcgcgcatcggccgtgacgacctgcatttctccagcgatgccgagcaagccatc
cgccactacagctggccgggtaacgtccgcgagttggagaacgccgtcgagcgcgcggtc
attctcagcgaaagcccggaaatatccgccgacctgctgggcatcgacatcgaactgagc
ggcctggaagacgacgacctccccgacagcctgccgatggtcgccggtgtcggtggaaac
aacgccagccacgagccgacggaagacctgtcgctggaagactacttccagcacttcgtc
ctcgaacaccaggaccacatgaccgagacggaactggcccgcaagctgggtgtaagccgc
aagtgcctgtgggagcgtcgccagcgcctgggtattccacggcgcaaaagcaacgtcgcc
agcgagaactga

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