Pseudomonas wayambapalatensis: HU734_022380
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Entry
HU734_022380 CDS
T08016
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
pwy
Pseudomonas wayambapalatensis
Pathway
pwy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pwy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HU734_022380 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pwy03019
]
HU734_022380 (pnp)
03016 Transfer RNA biogenesis [BR:
pwy03016
]
HU734_022380 (pnp)
Enzymes [BR:
pwy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
HU734_022380 (pnp)
Messenger RNA biogenesis [BR:
pwy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
HU734_022380 (pnp)
Transfer RNA biogenesis [BR:
pwy03016
]
Prokaryotic type
tRNA degradation factors
HU734_022380 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
S1_RRP5
KH-I_KHDC4-BBP
TraK_C
KH_2
OB_RRP5_4th
S1_2
KH_PNO1_2nd
Motif
Other DBs
NCBI-ProteinID:
QXI42959
LinkDB
All DBs
Position
complement(4987721..4989826)
Genome browser
AA seq
701 aa
AA seq
DB search
MNPVIKTFQFGQSTVTLETGRIARQATGAVLVTVDNDVTVLVTVVGAKQADPGKGFFPLS
VHYQEKTYAAGKIPGGFFKREGRPSEKETLTSRLIDRPIRPLFPEGFMNEVQVVCTVVST
SKKTDPDIAAMIGTSAALAISGIPFEGPIGAARVAFHESTGYLLNPTYEQLAASSLDMVV
AGTSDAVLMVESEAQELTEDQMLGAVLFAHDEFQAVIQAVKELAAEAGKPTWDWKPAVAN
TALFDAIRAEFGEAVSQGYTITVKADRYARLGELRDQAVAKFSGEEGQPSASEVKDIFGE
IEYRTVRENIVNGKPRIDGRDTKTVRPLNIEVGVLPKTHGSALFTRGETQALVVATLGTA
RDAQLLDTLEGEKKDPFMLHYNFPPFSVGECGRMGGAGRREIGHGRLARRSVQAMLPAPD
VFPYTIRVVSEITESNGSSSMASVCGASLALMDAGVPMKAPVAGIAMGLVKEGEKFAILT
DILGDEDHLGDMDFKVAGTAKGVTALQMDIKINGITEEIMEIALGQALEARLNILGQMNQ
IIGQSRTELSANAPTMIAMKIDTDKIRDVIGKGGATIRAICEETKASIDIEDDGSIKIFG
ETKEAADAAKQRILGITAEAEIGKIYVGKVERIVDFGAFVNILPGKDGLVHISMLSDARV
EKVTDVLKEGQEVEVLVLDVDNRGRIKLSIKDVAAAKASGV
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
gtgaacccggtaatcaagacgttccagttcggtcaatcgaccgtcactctcgaaacgggc
cgcattgcccgtcaggccaccggcgccgtgctggtcaccgtcgacaacgatgtcaccgtg
ctggtgaccgtggtcggtgccaagcaagctgatccaggcaagggcttcttcccgctgtcc
gtgcactatcaggaaaagacctacgccgctggcaagatccctggcggtttcttcaagcgt
gaaggccgtccttccgagaaagaaaccctgacctcgcgtctgatcgaccgtccgatccgc
ccgctcttccccgaaggcttcatgaacgaagtgcaggtcgtctgcaccgtggtttccacc
agcaagaagaccgatccggacatcgctgcgatgatcggtacctcggctgccctggccatc
tccggcattccgttcgaaggcccgatcggcgctgcccgcgttgccttccacgaaagcacc
ggctacctgctgaacccgacctacgagcaactggctgcctcgagcctggacatggtcgtt
gccggtacctccgacgccgtactgatggtcgaatcggaagcccaggagctgaccgaagac
cagatgctgggcgccgtgctgttcgcccacgacgaattccaggctgtgatccaggccgtc
aaggaactggccgccgaagccggcaagccaacctgggactggaaacctgccgtcgccaac
accgcactgttcgacgctatccgcgccgagttcggtgaagccgtatcccagggctacacc
atcaccgtcaaggccgaccgctacgcgcggctgggcgagctgcgcgaccaggccgtcgcc
aagttctccggtgaagaaggccagccatcggcgagcgaagtcaaagacatcttcggcgaa
atcgagtaccgcaccgttcgcgaaaacatcgtcaacggcaaaccgcgtatcgacggtcgt
gacaccaagaccgtgcgtccgctgaacatcgaagtcggtgttctgcctaagacccacggt
tcggcgctgttcacccgtggcgaaacccaggccctggtcgttgccaccctcggcaccgcc
cgtgacgcccagctgctggacaccctcgaaggcgagaagaaagaccccttcatgctgcac
tacaacttcccgccgttctcggtaggcgagtgtggtcgcatgggcggtgctggccgtcgt
gaaatcggtcacggtcgtctggcacgtcgctcggtccaggccatgctgcctgctcccgac
gtattcccgtacaccatccgtgtcgtttcggaaatcaccgaatccaacggttcgagctcc
atggcttcggtctgcggcgcttccctggccctgatggacgctggcgttccaatgaaggcg
ccggttgccggtatcgccatgggcctggtcaaggaaggcgagaaattcgcgatcctgacc
gacatcctgggtgatgaagaccacttgggcgacatggacttcaaggttgccggtaccgcc
aaaggcgtgaccgcgctgcagatggacatcaagatcaacggcatcaccgaagagatcatg
gagatcgccctgggccaggccctggaagcgcgcctgaacatcctcggccagatgaaccag
atcatcggtcagtcgcgtaccgaactgtcggccaacgccccgaccatgatcgcgatgaag
atcgacaccgacaagatccgtgacgtcatcggtaaaggcggcgccaccatccgcgccatc
tgtgaagaaaccaaggcctcgatcgacatcgaagacgacggctcgatcaagatcttcggc
gaaaccaaggaagcggcagatgctgccaagcagcgcatcctgggcatcaccgcagaagcc
gagatcggcaagatctacgtcggcaaggtcgagcgtatcgtcgacttcggcgccttcgtc
aacatcctgcctggcaaggacggtctggtgcacatctccatgcttagcgatgcgcgtgta
gagaaggtcaccgacgtgctgaaagaaggtcaggaagtcgaagtactggtactggacgtg
gacaaccgcggccgtatcaaactgtcgatcaaggacgtcgccgctgccaaggcatcgggt
gtctaa
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