Pseudomonas wayambapalatensis: HU734_022940
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Entry
HU734_022940 CDS
T08016
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
pwy
Pseudomonas wayambapalatensis
Pathway
pwy03030
DNA replication
pwy03430
Mismatch repair
pwy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pwy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HU734_022940 (holA)
03430 Mismatch repair
HU734_022940 (holA)
03440 Homologous recombination
HU734_022940 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pwy03032
]
HU734_022940 (holA)
03400 DNA repair and recombination proteins [BR:
pwy03400
]
HU734_022940 (holA)
Enzymes [BR:
pwy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HU734_022940 (holA)
DNA replication proteins [BR:
pwy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HU734_022940 (holA)
DNA repair and recombination proteins [BR:
pwy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HU734_022940 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delt_C
DNA_pol3_delta
DNA_pol3_delta_C
HP_1247_M
DNA_pol3_gamma3
Motif
Other DBs
NCBI-ProteinID:
QXI43068
LinkDB
All DBs
Position
5106701..5107738
Genome browser
AA seq
345 aa
AA seq
DB search
MKLSPAQLNKHLQGTLAPVYVVSGDDPLLCQEAADAIRAAARQQGFDERQVFSADANFDW
GSLLLAGASLSLFAQRRLLELRLPSGKPGDKGAAALMEYCANPAEDTLLLISLPKLDGSA
QKTKWGKALIEGEHCQFIQIWPVDAQQLPQWINQRLSQAGLSAQRDAIDLIAARVEGNLL
AAAQEIEKLKLLAEGNQITVETVQAAVADSARFDVFGLVDAILNGEAGHALRMLEGLRGE
GVEPPVILWALARELRLLAGLAQQFSQGVPLDKAFSQSRPPVWDKRRPLVSKALQRLSAQ
RWAQLLQDAQRIDAQIKGQAEGSPWTGLSRLSLLMAGQRLTLPSE
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgaagctttctcccgcccaactcaacaagcacctgcaaggcacactggccccggtctat
gtggtcagcggcgacgaccctctgctgtgccaggaagccgccgacgccattcgcgccgcc
gcgcgccaacagggcttcgatgaacgtcaggtgttcagcgccgatgccaacttcgactgg
ggtagcctgctgctggccggtgccagcctttcgctgttcgcccaacgacgtctgctggag
ctgcgcctgccgtcgggcaaacccggcgacaagggcgctgctgcgctcatggagtattgc
gccaatcccgccgaggacacgctgctgctgatcagcctgcccaagcttgacggcagtgcg
cagaagactaaatggggcaaggccctcatcgagggtgaacactgccaattcattcagatc
tggccggtggacgcccagcagttgccgcaatggatcaaccagcgcctgtcccaggccggg
ctgtcggcgcagcgcgatgcgatcgacctgatcgccgcaagggtcgagggcaacctgctg
gcggccgcccaggagatcgagaaactcaagctgctcgccgagggcaaccagatcaccgtc
gagaccgtccaggccgcggtcgccgacagcgctcgcttcgatgtgttcggcctggtcgat
gccatcctcaacggcgaggccgggcatgccctgcgcatgctcgaagggctgcgtggcgag
ggcgtcgagccgccggtcattctatgggcgctggcgcgcgagctgcgcctgttggcgggt
ctggcccagcagttcagccagggcgtgccgctggacaaggccttcagccagtcgcgccca
ccagtgtgggataaacgccgccctctggtcagcaaggctctgcagcgcctgtcagcgcaa
cgttgggcgcaactgctgcaggatgcccagcgtatcgacgcacagatcaaaggccaggcc
gagggctcgccgtggaccgggttgtcgcggctgtcgctgttgatggccggccagcgcctg
acgcttccttcggaataa
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