KEGG   Pseudomonas wenzhouensis: J7655_03190
Entry
J7655_03190       CDS       T07852                                 
Symbol
hfq
Name
(GenBank) RNA chaperone Hfq
  KO
K03666  host factor-I protein
Organism
pwz  Pseudomonas wenzhouensis
Pathway
pwz02024  Quorum sensing
pwz03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pwz00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    J7655_03190 (hfq)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    J7655_03190 (hfq)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pwz03019]
    J7655_03190 (hfq)
   03036 Chromosome and associated proteins [BR:pwz03036]
    J7655_03190 (hfq)
Messenger RNA biogenesis [BR:pwz03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     J7655_03190 (hfq)
Chromosome and associated proteins [BR:pwz03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    J7655_03190 (hfq)
SSDB
Motif
Pfam: Hfq LSM Hfq_1 Gag_p24_C
Other DBs
NCBI-ProteinID: UFQ98246
LinkDB
Position
702442..702702
AA seq 86 aa
MSKGHSLQDPYLNTLRKERVPVSIYLVNGIKLQGQIESFDQFVILLKNTVSQMVYKHAIS
TVVPSRPVRLPSAGDAEQGDSEPGNA
NT seq 261 nt   +upstreamnt  +downstreamnt
atgtcaaaagggcattcgctacaagacccttacctgaataccctgcgtaaggaacgcgtc
cctgtttccatctatctggtcaacggcatcaagctgcagggccagatcgagtccttcgac
cagttcgtcatcctgctgaagaacaccgtcagccagatggtctacaagcacgccatttcc
accgtcgtccccagccgtccggtgcgtttgccgagcgcaggtgatgccgagcagggcgat
agcgaaccgggtaacgcctga

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