Pseudomonas wenzhouensis: J7655_04890
Help
Entry
J7655_04890 CDS
T07852
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
pwz
Pseudomonas wenzhouensis
Brite
KEGG Orthology (KO) [BR:
pwz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pwz03400
]
J7655_04890 (phrB)
Enzymes [BR:
pwz01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
J7655_04890 (phrB)
DNA repair and recombination proteins [BR:
pwz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
J7655_04890 (phrB)
Prokaryotic type
J7655_04890 (phrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
UFQ98563
LinkDB
All DBs
Position
complement(1075982..1077418)
Genome browser
AA seq
478 aa
AA seq
DB search
MQQLMWFRSDLRTQDNTALSQAMSSGATIALYLVTPGQWQRHDDAPSKVDFWLRNLVELS
QALARLNVPLLVRQCHDWQEVPAQVAEVCHEHNISAVHVNEEYGINESVRDQHVAAYLGQ
QAIAWHSHLDQIFFKPGSVLTRSGGYFQVYSQFRKVCYERLHSALPAVIGQPQAQAPLPV
SSDAIPAAVDGFAPPSDSLRLLWPAGEQAALQRLQRFADEQVLFYKDERDFPDKPGTSQL
SAYLAAGVLSPRQCLHAALAANQGEFDSGNPGVVTWINELLWREFYKHILVGYPRVSRHR
AFRLETEAVPWRHAPQELAAWQEGRTGLPIIDAAMRQLLATGWMHNRLRMIVAMFLTKNL
LIDWREGERFFMRHLIDGDLAANNGGWQWSASTGTDAAPYFRIFNPISQSQKFDPDGHFI
RQWVPELAGLNKRDIHDPSSLGGLFAPSGYPRPIVDLSRSRERALAAFKNLSAQEVPA
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgcaacagttgatgtggtttcgcagcgacctgcgcacccaggacaacaccgcactgagc
caggcaatgagcagcggcgcgaccatcgccctgtatctcgtcacgcctggccagtggcag
cgccatgacgatgcaccgagcaaggtggacttctggctgcgcaacctggtcgagctgagc
caggcgctggccaggctcaatgtgccgctactggtgcgccagtgccatgactggcaggaa
gtccccgcgcaagtggccgaagtctgccacgagcacaacatcagcgccgtccatgtcaac
gaggagtacggcatcaacgagagtgtgcgcgaccagcatgtcgccgcctacctcgggcag
caggccatcgcctggcacagccacctcgaccaaatcttcttcaagcctggcagcgttctg
acccgctcgggcggctactttcaggtctacagccagttccgcaaggtctgctacgagcgt
ctgcacagcgcactgccggcggtgatcgggcaaccgcaagcacaagcgcctctgcccgtc
agcagcgatgccatccccgcagccgtcgacggcttcgcccctcccagcgacagcctgcgc
ctgctctggcctgccggcgagcaggcagccctgcaacgcctgcagcgctttgccgacgag
caggtgctgttctacaaggacgaacgcgacttcccggacaaacccggtaccagccagctg
tccgcctacctcgccgcgggtgtgctctccccccggcagtgcctgcatgcggcgctcgcc
gccaaccagggtgagttcgacagcggcaatcccggtgtcgtcacctggatcaacgagctg
ctttggcgcgagttctacaaacacattctggtcggctacccacgcgtctcgcgccaccgc
gcctttcgcctggaaaccgaagccgtgccatggcgccacgctccgcaggagctggccgcc
tggcaggaaggccgcaccggcttgccgatcatcgacgccgccatgcgccagttgctggca
accggctggatgcacaaccgtctgcgcatgatcgtggccatgtttctgaccaagaacctg
ctgatcgactggcgcgagggcgagcgcttcttcatgcgccacctgatcgacggcgacctg
gccgcgaacaacggcggctggcagtggagcgcgtccaccggcaccgatgcggcgccctac
ttccgtattttcaatccgatcagccagtcgcagaaattcgaccccgacggccacttcatc
cgccagtgggtgccggagctggccgggctgaacaaacgcgacattcacgatccatcctca
ctcggtggcctgttcgcgccgtcgggctatccgcgcccgatcgtcgacctgtcacgctcg
cgtgagcgcgccctggcggcattcaagaacctctcggcgcaggaggtgccggcatga
DBGET
integrated database retrieval system
