Pseudomonas wenzhouensis: J7655_07355
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Entry
J7655_07355 CDS
T07852
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
pwz
Pseudomonas wenzhouensis
Pathway
pwz03030
DNA replication
pwz03430
Mismatch repair
pwz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pwz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
J7655_07355 (dnaE)
03430 Mismatch repair
J7655_07355 (dnaE)
03440 Homologous recombination
J7655_07355 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pwz03032
]
J7655_07355 (dnaE)
03400 DNA repair and recombination proteins [BR:
pwz03400
]
J7655_07355 (dnaE)
Enzymes [BR:
pwz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
J7655_07355 (dnaE)
DNA replication proteins [BR:
pwz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
J7655_07355 (dnaE)
DNA repair and recombination proteins [BR:
pwz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
J7655_07355 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
tRNA_anti_2
HHH_3
HROB
Motif
Other DBs
NCBI-ProteinID:
UFQ98990
LinkDB
All DBs
Position
1613681..1617211
Genome browser
AA seq
1176 aa
AA seq
DB search
MTQAFVHLRLHTEYSLVDGLVRVKPLIKAVAGAGMPAVAVTDMSNMCSLVKFYKTAMGAG
VKPICGADIWMASAEEDGPLTRLTLLAMNAKGYRNLTELISRGWAEGQSNDLVIIQRDWV
KEAAEGLIALSGAREGEVGMALLAGDEALAEMRLREWMAAFPERFYLEVQRTSRVGDEEY
LHAAVALADRVEAPLVATNDVRFIKQDDFEAHETRVCIGEGRTLDDPRRPRNYSDQQYLK
STEEMWELFSDLPEALENTVEIAKRCNIDVQLGKYFLPDFPTPNGMGIDDYLRHASFEGL
EERLQVLLPKDTPDYEAKRQVYIDRLNFELDIIIQMGFPGYFLIVMDFIQWAKNNGVPVG
PGRGSGAGSLVAYVLKITDLDPLAYDLLFERFLNPERISMPDFDVDFCMDGRDRVIDYVA
EKYGRNAVSQIITFGSMAAKAVVRDVARAQGKSYGLADRLSKMIPFEVGMTLEKAYEMEE
PLRDFLKSDEEAQEIWDMSLKLEGVVRGTGKHAGGVVIAPTKLTDFSPIACDEEGGGLVT
QFDKDDVEQAGLVKFDFLGLRTLTIIKWAMETIHRIQKRDGALDEDLVNIDFIPLDDKKT
YDMLQKAETTAVFQLESRGMKELIKKLKPDCLEDMIALVALFRPGPLQSGMVDDFINRKH
GRAELSYPHPDYQYAGLEPVLKPTYGIILYQEQVMQIAQVMAGYTLGGADMLRRAMGKKK
PEEMAKQRGGFIEGCANNGIDAELAGNIFDLVEKFAGYGFNKSHSAAYGLVSYQTAWLKA
HYPAPFMAAVLSADMHNTDKVVILVEECRNMKLRIDPPDVNVSEFKFTVNDDGRIVYGLG
AVKGVGEGPVEAIVECRAEGGPFKDLFDFCNRVDLKRINKRTLEALIRSGALDRLGPYYQ
DELKAYQASVDKNRAVLLASMEEAVQSAEQTARSAESGHMDLFGGLFAEPEADVYANHRK
ARELPIKERLKGEKDTLGIYLSGHPIDEYEGEIRRFARQRIVELKPARDTQAIAGMIVNL
RVMKNKKGDKMGFITLDDRSGRIEASLFADAFASNQALLQNDALVVVEGEVSNDDFSGGL
RLRAKRVMSLEEARTGLADSLRLKVAGEALKGDRLRWLAELCSKHKGACPVTVDYSGEEA
RALLQFGDAWRIDPADTLIQALRDQFGRDNVFLHYR
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
atgacccaagcgttcgtccatctgcgtctgcacaccgaatactccctggtcgatggcctg
gtgcgggtcaagccgctgatcaaggccgttgccggggccggcatgccggcggtggcggtc
accgacatgagcaacatgtgctcactggtgaagttctacaagacggccatgggcgccggg
gtcaagccgatctgcggcgccgatatctggatggccagcgccgaggaagacggcccgctg
acgcgcctgaccctgttggcgatgaacgccaagggctaccgcaaccttaccgaactgatc
tctcgtggctgggccgaagggcagagcaacgacctggtgatcattcagcgtgactgggtc
aaggaggccgccgaaggcctgattgccctgtccggcgcgcgtgagggtgaagtcggcatg
gcgttgctggccggtgacgaagccttggccgagatgcgcctgcgcgagtggatggcggcc
ttccctgagcgcttctacctggaagtgcaacgcaccagtcgcgtcggcgacgaagaatac
ctgcatgccgccgtggcgctggctgatcgtgtcgaggcgccactggtggccaccaacgac
gtgcggttcatcaagcaggacgacttcgaggcgcacgaaacacgcgtctgcatcggcgag
ggtcgtacgcttgatgacccgcgtaggccgcgcaattactccgatcagcagtacctgaaa
agcaccgaagaaatgtgggagctgttctccgatctgccagaagcactggagaacaccgtc
gagatcgccaagcgctgcaacatcgatgtgcagcttggcaaatactttctgccggacttc
cccacgcccaatggcatgggcatcgacgactacctgcgccacgcctccttcgaggggctg
gaagagcgtctccaggtattgctgcccaaggacacgccggattacgaggccaagaggcag
gtctacatcgaccgcctcaacttcgagctcgacatcatcatccagatgggtttccccggt
tacttcctgatcgttatggacttcatccagtgggccaagaacaacggcgtgccggtcggc
cctggccggggctcgggtgccggttcgctggtggcctacgtgctgaagatcaccgacctt
gacccgttggcctatgacctgctgttcgagcgtttcctcaacccggaacggatttccatg
cctgactttgacgtcgacttctgcatggatggccgcgaccgggtgatcgactacgtggcc
gagaagtacgggcgtaatgcggtgagtcagatcatcaccttcggctcgatggcggccaag
gcggtggtgcgcgatgtggcgcgggcgcagggcaagtcctacggcctggctgaccgtctg
tcgaagatgatccccttcgaagtgggcatgaccctggagaaagcctacgagatggaggag
ccgctgcgcgacttcctcaagagcgacgaggaagcccaggaaatctgggacatgtcgctc
aagctcgaaggcgtggtgcgcggcaccggcaagcacgctggtggtgtggttatcgcaccg
accaaactcaccgatttttcgccgatcgcctgtgacgaagagggcggcggcctggtgacc
cagttcgacaaggatgacgtcgagcaggccggcctggtcaagttcgacttcctaggtttg
cgtacgctgaccatcatcaaatgggcgatggagaccatccaccgtatccagaagcgcgac
ggcgcgctggatgaggatctggtcaacatcgacttcatcccgctggatgacaagaaaacc
tacgacatgctgcagaaggcggagaccactgcggtcttccagcttgaatcgcgcggcatg
aaggagctgatcaagaagctcaagcccgactgcctggaagacatgatcgcactggtggcg
ctgttccgccctggcccgctgcaatcgggcatggtggacgacttcatcaaccgtaagcac
ggtcgtgccgagctgtcctacccgcacccggactaccagtacgctggcctggagccggtg
ctcaagcccacctacggcatcatcctgtaccaggaacaggtgatgcagatcgcccaggtg
atggccggctacaccctcggcggcgcggacatgctgcgtcgtgccatgggtaagaagaag
cccgaggagatggccaagcagcgcggtggcttcatcgaaggttgcgccaacaatggcatc
gatgccgagttggccggtaacatcttcgacctggtggaaaagttcgccggttacggcttc
aacaagtcgcactcggccgcttacggtctggtgtcctaccagactgcctggctcaaggcg
cattacccggcgccgttcatggccgcggtgctctcggcggatatgcacaacaccgacaag
gtggttatcctggtcgaagagtgccgcaacatgaagttgcgcatcgacccgccggatgtg
aacgtttccgagttcaagttcacggtcaacgatgacggccgtatcgtctacggtctcggt
gcggtcaaaggtgtgggtgaagggcccgtggaggccatcgtcgaatgccgtgccgaaggt
gggccgttcaaggatctgttcgacttctgcaaccgcgtcgacctcaaacgcatcaacaaa
cgcaccctggaggcgttgatccgcagcggcgcactggatcgcctcggcccctattatcag
gacgagctcaaggcttatcaggccagcgtggacaagaaccgcgccgtgctgctggcgtcc
atggaagaggccgtgcagtccgccgagcagaccgcgcgcagcgccgagagcggccacatg
gatctgttcggcgggctgttcgccgagcccgaggcggacgtctacgccaaccaccgcaag
gcccgcgagctgccgatcaaggaacgcctgaaaggagagaaggacaccctgggcatctac
ctgtccggccaccccatcgacgaatacgaaggcgagattcgccgcttcgcccgtcagcgc
atcgtcgaactcaagccggcgcgcgacacccaggccatcgccgggatgatcgtcaatctg
cgggtgatgaagaacaagaagggcgacaagatgggtttcatcaccctcgacgaccgctcc
gggcgtatcgaggcctcactgtttgccgatgccttcgccagcaaccaggcgctgctgcag
aacgatgcactggtggtggtcgaaggtgaagtcagcaacgacgacttctccggcggtttg
cgtctgcgtgccaagcgcgtgatgagcctggaggaggcgcgcactggcctggccgacagc
ctgcggctgaaggtcgccggtgaggcattgaagggcgatcgtctgcgttggctggccgag
ctgtgcagcaagcacaagggcgcttgcccggtgaccgtcgactacagtggcgaggaggcg
cgcgccttgcttcaatttggcgatgcttggcgaatcgacccggccgacactttgatacag
gcattgcgtgaccagttcgggcgcgacaacgtctttttgcactaccgctga
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