Pseudomonas wenzhouensis: J7655_10055
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Entry
J7655_10055 CDS
T07852
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
pwz
Pseudomonas wenzhouensis
Pathway
pwz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pwz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
J7655_10055 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pwz03400
]
J7655_10055 (recD)
Enzymes [BR:
pwz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
J7655_10055 (recD)
DNA repair and recombination proteins [BR:
pwz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
J7655_10055 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
RecD_N
AAA_11
UvrD_C_2
Helicase_RecD
AAA_22
Viral_helicase1
SH3_13
UvrD-helicase
AAA_16
TraI_hel_assoc_N
SLFN-g3_helicase
PhoH
nSTAND3
AAA_28
Mg_chelatase
NTPase_1
ATPase
DEAD
AAA_7
AAA_29
AAA_17
T2SSE
AAA_25
TrwB_AAD_bind
AAA_18
AAA_5
GvpD_P-loop
AAA_24
UvrD_C
Motif
Other DBs
NCBI-ProteinID:
UFQ99458
LinkDB
All DBs
Position
2200328..2202358
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AA seq
676 aa
AA seq
DB search
MSTMLAPALRDRAELFTLLSIWSERGWLRELDRTLAQLFAELDPQASPLLLLGAALASHQ
LGQGHVCLDLAATLANPDFTLSLPPEGEDAEEAMILPSQVLTGLSLESWLAACAGSSLLE
SEGAPLVLSGACLYMRRYWNYERQVAGDIARRLQASAASPADLAARLASLFPEPLMVDGQ
RLTDWQKLACAMAAQGRFTLITGGPGTGKTTTVVRLLALLQEAAMATGEPLRLSLAAPTG
KAAARLTESIGAQVQSLALDEKVRVQIPTLVTTLHRLLGSRPGSRHFRHDAANPLPLDVL
VVDEASMIDLEMMASLLDALPAHARLILLGDKDQLASVEAGAVLGDLCREAESGGYSEAT
RAWLESQTGERLDDPVLRRGDKALAQHIVMLRHSRRFGSGSGIGRLARAVNQGDAQTARA
TLAAGADDLHVLRLSSEQDRALERLLIEGLGGREPRPQGYAHYLQVMQAQRPAPDADSLA
WDGWAANVLAAFDQFQLLCAVRKGAWGVEALNERIAEALVRRNLLEQAYGWYEGRPVLVT
RNDYSLGLMNGDIGIALRLPEPPESPGAPVREVLRVVFPRNDGSGALRHILPSRLSAVET
VFAMTVHKSQGSEFAHCALILPDNLNPVLTKELVYTGITRARHWFSLIESRAGIFEQAVQ
RRVQRRSGLREALEAL
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atgagtacgatgcttgcaccggcgctgcgcgatcgcgccgaactctttaccttgctttct
atatggagcgagcgtggttggctgcgcgagctggatcgtacattggcgcagttgttcgcc
gagctggatccgcaggcttcaccgctgctcctgctcggcgccgcactggccagtcaccag
ctgggccaggggcatgtctgcctggatctggcggctacgctggccaaccctgacttcacc
ctgtccctgccgccggaaggggaggacgcagaagaggcgatgatcctgccgtctcaggta
ctgactgggctcagcctggagtcctggctcgcagcctgtgccggcagctcgttgctggag
tccgagggggcgccattggtgctcagcggcgcctgtctatatatgaggcgttactggaac
tatgagcgccaggtggcaggcgatatcgcccggcgactgcaggcgagcgctgcttcgccg
gccgacctggctgcgcggctggcttcactctttcccgaaccgctgatggtggacggccag
cgtctgaccgactggcagaagctggcctgcgccatggcggcgcaagggcgcttcaccctg
atcaccggaggaccaggcaccggcaagaccaccacggtggtacgcctgctggctttgttg
caggaggcggctatggccactggcgagcccctgcgcctgagtctggcagcgcccaccggt
aaggcagccgcgcggttgaccgagtccattggcgcgcaagtgcagtccctggcgctggat
gaaaaggtgcgtgtgcagattccaaccttggtcacgacattgcaccgcttgctcggcagt
cgtcctggcagccggcatttccgtcacgatgccgccaatcctctgccgctggatgtgctg
gtggtggacgaggcgtcgatgatcgacctggaaatgatggccagcctgctggacgcgctg
ccagcgcatgcgcgtttgattctgctgggcgacaaggatcaactggcgtcggtagaggct
ggcgcggtgctgggcgacctgtgtcgggaggcagaaagcggcggctacagcgaagcgacg
cgcgcctggttggaaagccagacgggagagcggctggacgatccggtgttgcggcgcggt
gacaaagcgctggcgcaacatatcgtcatgctgcgccactcgcgccgcttcggcagtggc
tcgggtattgggcgtctggcgcgtgcggtaaaccagggcgatgcgcagacggctcgtgcg
actttggcagccggcgcggatgacctgcatgtgctgcgtctatcgagtgagcaggatcgt
gcgctggagcgactgcttattgaggggctgggcggcagggagcctcgtccgcagggatat
gcccattatctgcaggtgatgcaggcgcagcgccccgccccagatgctgactccctggcc
tgggatggttgggccgctaatgtcctggcggcgttcgatcagttccaactgctctgcgcc
gttcgcaagggtgcctggggtgtggaggctctcaacgaacgtatcgccgaagcgctggtg
cgccgtaacctgctggagcaagcctatggctggtatgaggggcggcctgtgctggtaacg
cgcaatgactacagccttggtctgatgaatggcgatatcggcatcgcgctgcgcctaccg
gagccgcctgaatctccgggcgcgcctgtacgcgaggtgttgcgagtggtattcccgcgc
aacgacggtagcggcgccctgcgtcatatcctgcccagccgcctgagcgcggtagaaaca
gtgttcgccatgaccgtacacaagtcgcagggctcggagttcgcccactgtgcgctgatc
ctgcccgataacctcaacccggtactgaccaaggaattggtctacaccggtatcacgcgg
gctcgccactggttcagcctcattgaaagtcgcgcaggcatcttcgagcaggcggtacag
cgtcgcgtgcagcgccgcagcggcctgcgcgaggcgctcgaagcgctatga
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