Pseudomonas wenzhouensis: J7655_13360
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Entry
J7655_13360 CDS
T07852
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
pwz
Pseudomonas wenzhouensis
Brite
KEGG Orthology (KO) [BR:
pwz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pwz03009
]
J7655_13360 (rimO)
Enzymes [BR:
pwz01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
J7655_13360 (rimO)
Ribosome biogenesis [BR:
pwz03009
]
Prokaryotic type
ribosomal protein modification factors
J7655_13360 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
CLP1_P
YajR_YAM
RNase_II_C_S1
TRAM
Motif
Other DBs
NCBI-ProteinID:
UFQ96302
LinkDB
All DBs
Position
2922754..2924076
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AA seq
440 aa
AA seq
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MSTATPKVGFVSLGCPKATVDSERILTQLRMEGYEIVPTYQDADVVVVNTCGFIDSAKAE
SLDAIGEALAENGKVIVTGCMGVAEDSIRDVHPSVLAVTGPQQYEQVVNAVHEVIPPKTE
HNPLIDLVPPQGIKLTPRHYAYLKISEGCNHTCSFCIIPSMRGKLVSRPVGDVLSEAERL
VKAGVKELLVISQDTSAYGVDMKYKLDFWNGQPVKTRMLELCEALSSMGVWVRLHYVYPY
PNVDDVIPLMAAGKLLPYLDIPFQHASPKVLKSMKRPAFEDKTLARIKKWREICPELTIR
STFIVGFPGETEEDFQYLLDWLTEAQLDRVGCFQYSPVEGAPANDMGLEPVPDEVKQERW
ERFMAHQQAISSARLQAKIGLEMDVLVDEVDGEGAVARSWADAPEIDGSVFIDSTNVKPG
DKVRVRIVDADEYDMWGELV
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccgccaccccaaaagtcggattcgtctcgctcggatgcccgaaagcgactgtc
gactccgaacgcatcctgacccaactgcgtatggaaggttacgaaatcgtgccgacctac
caggatgccgacgtggtggtggtcaatacctgcggtttcatcgacagtgccaaggccgaa
tcgctagacgccatcggtgaggcgctggcggaaaacggcaaggtgatcgtcaccggttgc
atgggcgtggctgaagacagcatccgcgacgtgcacccgagcgtgctggcggtaaccggc
ccgcagcagtacgagcaggtggtcaacgccgtacacgaagtcatcccgccgaagaccgag
cacaatccgctgatcgacctggtgccgccgcaaggcatcaagctgaccccgcgccactat
gcgtacctgaagatttccgaaggctgcaaccatacctgcagcttctgcatcatcccgtct
atgcgcggcaagctggtcagccgcccggtgggcgatgtgctcagcgaagccgagcgcctg
gtcaaggccggcgtcaaggagctgctggtgatcagccaggacaccagcgcctacggcgtc
gacatgaagtacaagctggacttctggaacggccagccagtgaaaacgcgcatgctcgaa
ctgtgcgaagcgctgtcgtcgatgggcgtgtgggtgcgcctgcactacgtctacccctac
cccaacgtcgatgacgtgatcccgctgatggccgccggtaagctgctgccgtacctggac
atccccttccagcacgccagcccgaaagtgctcaagtcgatgaagcgcccggccttcgaa
gacaagaccctggcgcgcatcaagaaatggcgcgagatctgcccggagctgaccattcgc
tccaccttcatcgtcggcttccctggcgagaccgaagaagacttccagtacctgctggac
tggctgaccgaggcgcagctcgaccgcgtcggctgcttccagtactcgccggtcgaaggc
gcaccggccaacgacatgggcctggagccggtaccggatgaggtcaaacaggagcgctgg
gagcgtttcatggcgcatcagcaggcgatcagctcggcgcgtctgcaggccaagatcggt
ctggagatggacgtcctggtcgacgaagtggatggcgaaggcgccgtggcgcgctcctgg
gccgacgccccggagatcgacggcagcgtgttcatcgactccaccaacgtcaagccgggc
gacaaggtgcgcgtgcgcatcgtcgatgccgacgaatacgacatgtggggcgagctggtc
tga
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