Pseudomonas wenzhouensis: J7655_16085
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Entry
J7655_16085 CDS
T07852
Symbol
sbcD
Name
(GenBank) exonuclease subunit SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
pwz
Pseudomonas wenzhouensis
Brite
KEGG Orthology (KO) [BR:
pwz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pwz03400
]
J7655_16085 (sbcD)
DNA repair and recombination proteins [BR:
pwz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
J7655_16085 (sbcD)
Archaeal homologous recombinant proteins
J7655_16085 (sbcD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
UFQ96799
LinkDB
All DBs
Position
complement(3485119..3486339)
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AA seq
406 aa
AA seq
DB search
MSLRVLHTSDWHLGQHFMGKTRQAEHQAFCAWLLEQVRAHQVDVLLIAGDVFDTGAPPSY
AREQYYRLVVALRDAGCALVVLGGNHDSPAMLGESRSLLAQLGTHVVPGVGVDLAEQVLL
LKDRAGQPGAILCAIPFIRPRDVMSSQAGQSAQDKQQSLQQAIAEHYRALHELALSKREA
LGLALPIIATGHLTTVGASASESVREIYVGSLEAFPTSAFPPADYIALGHIHRPQKVGGL
EHVRYCGSPIALSFDEARQQKEVLLLQFGEAALHSITALPVPVFQPMASLRGSLKELADA
IAEIAKQGTPERPVWLEVQVSTDDYLSDLQSRINALCEGHPVEVLRIRRERGNASANLTS
EARETLDELSVEDVFVRRLQQEALQEEDAQRLQGLYWQVLETLPNA
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgcgcgtcctgcatacatccgactggcaccttggccagcacttcatgggcaag
acccgccaggccgaacaccaggctttttgcgcctggctgctggagcaggtgcgcgcgcat
caggtggacgtgctgctgatcgccggcgatgtgttcgacaccggcgcgccacccagctat
gcccgcgagcagtattaccgcctggtggtggcgctgcgcgatgccggttgcgccctggtg
gtgctcggcggcaaccacgattcaccggccatgctcggtgagagtcgcagcctgctggcg
caactgggcacgcatgtggtgccgggtgtgggagtcgatctggccgaacaggtgctgctg
ctgaaggatcgcgctggccagccgggcgccatcctctgcgccatcccctttatccgcccg
cgtgacgtcatgtccagccaggccgggcaaagcgcacaggacaaacagcaatcgctgcaa
caggccatcgccgagcactaccgcgcgttacacgagctggcgctgagcaagcgcgaggca
ctgggcctggcactgccgatcatcgccaccggccacctgaccaccgtcggcgccagtgcc
agcgagtcggtacgggaaatctacgtcggcagcctggaagccttccctaccagcgccttc
ccgccagccgactacatcgccctcggccatatccaccgcccacaaaaggttggcggtctg
gagcatgtccgctactgcggctcgcccattgccctgtccttcgacgaagcgcgccagcag
aaggaagtgctgctgctgcagttcggcgaggccgcgctgcactcgatcacagcgctgccc
gtgccggtatttcagccaatggcgagcctgcgcggctcgctcaaggaactggccgatgcc
atcgccgaaatcgccaagcagggcacacccgaacggcccgtatggctggaagtgcaagtg
agcaccgatgactacctgagcgacctgcaaagccgcatcaacgccctgtgcgaaggtcac
cccgtcgaagtgctacgcatccgccgcgaacgtggcaacgcatcggccaacctgaccagc
gaagcgcgggaaacgctggacgaactatccgtggaagacgtcttcgtccgccgcctgcag
caggaagccttgcaggaagaggatgcccagcgcttgcaagggctgtattggcaagtgctg
gaaacactgcccaacgcctaa
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