Pseudomonas wenzhouensis: J7655_16200
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Entry
J7655_16200 CDS
T07852
Symbol
rhlB
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
pwz
Pseudomonas wenzhouensis
Pathway
pwz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pwz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
J7655_16200 (rhlB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pwz03019
]
J7655_16200 (rhlB)
Enzymes [BR:
pwz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
J7655_16200 (rhlB)
Messenger RNA biogenesis [BR:
pwz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
J7655_16200 (rhlB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
Motif
Other DBs
NCBI-ProteinID:
UFQ96819
LinkDB
All DBs
Position
3509251..3510696
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AA seq
481 aa
AA seq
DB search
MLEALKKMFGKAEGEQPQPDTAPVAPAPAKTGATHDNERQDNPARKPEASATQSAERVPR
PAKADKPRRERPAKPLDTWKLEDFVVEPVEGKTRFHDFKLAPELMHAIHDLGFPYCTPIQ
AGVLGYTLKGQDAIGRAQTGTGKTAAFLISIITQLLQTPPPKERYMGEPRALIIAPTREL
VVQIAKDAAELTKYTGLNVMQFVGGMDFDKQLKQLESRFCDILVATPGRLLDFNQRGEVH
LDMVEVMVLDEADRMLDMGFIPQVRQIIRQTPMKGDRQTLLFSATFTDDVMNLAKQWTVN
PAIVEIEPENVASDTVEQHVYAVASADKYKLLYNLISQNNWTRVMVFANRKDEVRRIEER
LTRDGISAVQMSGDIPQHKRIRALEGFREGKIRVMVATDVAGRGIHVDGISHVINFTLPE
DPDDYVHRIGRTGRAGSSGTSISFAGEDDAYALPPIEALIGRKIQCEMPPDELLKPVPRK
P
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
gtgctcgaagcactcaagaaaatgttcggcaaggccgaaggcgagcagccacagccagac
actgcacccgtagcgcctgcaccggccaagaccggcgcaacccatgacaacgagcgccag
gacaaccctgcgcgcaaacccgaagccagcgccacgcagagtgcagagcgtgtgccgcgt
ccggccaaggccgacaagccgcgccgcgagcgcccggcaaaaccgctggacacctggaag
ctggaagacttcgtggtcgagccggtcgaaggcaagacgcgcttccatgacttcaagctc
gcccccgagctgatgcatgccattcacgacctcggcttcccctactgcacgccgattcag
gcgggcgtactgggctacaccctcaagggccaggacgccatcggtcgcgcccagaccggt
accggcaagactgccgcgttcctcatctcgatcatcacccaactgctgcagaccccaccg
ccgaaagagcgctacatgggcgagccgcgcgcgctgatcatcgcgccgacccgtgaactg
gtggtgcagatcgccaaggacgcggccgagctaaccaaatacaccggcctcaacgtcatg
cagttcgtcggcggcatggatttcgacaagcaactcaagcagctggaatcgcgcttctgc
gacatcctcgtcgctaccccgggccgcctgctggacttcaaccagcgcggtgaagtgcac
ctggacatggtcgaggtgatggtgctcgatgaggccgaccgcatgctcgacatgggcttc
atcccgcaggtacggcagatcatccgccagacgccgatgaagggcgaccgccaaaccctg
ctgttctccgccaccttcaccgacgacgtgatgaacctggccaagcagtggacggtcaac
ccggccatcgtcgagatcgagccggagaacgttgccagcgacaccgtcgagcagcacgtc
tacgccgtggcctcggcagacaagtacaagctgctgtacaacctgatcagccagaacaac
tggacgcgggtaatggtcttcgccaaccgcaaggacgaagtacgccgtatcgaggagcgc
ctgacccgcgacggcatcagcgccgtgcagatgtccggcgacatcccccagcacaagcgc
atccgcgcgctggaaggcttccgtgaaggcaagatccgcgtcatggtcgccaccgatgtg
gccgggcgcggtatccacgtcgatggcatcagccatgtgatcaacttcaccctgccggaa
gatccggacgactacgtgcaccgcatcggtcgtaccggccgtgccggcagcagcggcacc
tcgatcagcttcgccggcgaggacgacgcctacgccctgccgccgatcgaagcgctgatc
gggcgcaagatccagtgcgagatgccaccggacgaactgctcaagccggtgccacgcaag
ccctga
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