Pseudomonas wenzhouensis: J7655_16555
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Entry
J7655_16555 CDS
T07852
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
pwz
Pseudomonas wenzhouensis
Pathway
pwz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pwz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
J7655_16555 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pwz03019
]
J7655_16555 (pnp)
03016 Transfer RNA biogenesis [BR:
pwz03016
]
J7655_16555 (pnp)
Enzymes [BR:
pwz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
J7655_16555 (pnp)
Messenger RNA biogenesis [BR:
pwz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
J7655_16555 (pnp)
Transfer RNA biogenesis [BR:
pwz03016
]
Prokaryotic type
tRNA degradation factors
J7655_16555 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
S1_RRP5
KH-I_KHDC4-BBP
OB_RRP5_4th
KH_2
KH_N4BP1_2nd
S1_2
ANAPC1
Motif
Other DBs
NCBI-ProteinID:
UFQ96882
LinkDB
All DBs
Position
complement(3587402..3589507)
Genome browser
AA seq
701 aa
AA seq
DB search
MNPVIKKFQFGQSTVTLETGRIARQASGAVLVTVDDDVSVLVAVTGAKTADPSKGFFPLS
VHYQEKTYAAGKIPGGFFKREARPSEKETLTSRLIDRPIRPLFPEGFQNEVQVICTVVST
SKKTDPDIAAMIGTSAALAISGIPFNGPIGAARVAFHPETGYLLNPNYEQLKASSLDMVV
AGTKDAVLMVESEAKELTEDQMLGAVLFAHEEFQVVIQAVAELAAEAGKPTWDWQPKPEN
TALLNAIRSEFGEAISQAYTITVKQDRYARLGELRDQVVAKFSGEEGQPTAGEVKEAFGE
IEYRTVRENIVNGKPRIDGRDTRTVRGLNIEVGVLDKTHGSALFTRGETQALVVATLGTA
RDAQLLDTLEGEKKDPFMLHYNFPPYSVGECGRMGATGRREIGHGRLARRGVAAMLPSAD
EFPYTIRVVSEITESNGSSSMASVCGASLALMDAGVPMKAPVAGIAMGLVLEGEKFAVLT
DILGDEDHLGDMDFKVAGTAKGVTALQMDIKIQGITEEIMEQALEQALEARLNILGQMNQ
VIAQSRSELSANAPTMIAMKIDQDKIRDVIGKGGATIRAICEETKASIDIEDDGSIKIFG
ETKEAAEAARQRVLGITAEAEIGKIYVGKVERIVDFGAFVNILPGKDGLVHISMLSDQRV
EKVTDVLKEGQEVKVLVLDVDNRGRIKLSIKDVAAAEASGV
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
gtgaacccggtaatcaagaaattccagttcggtcagtcgaccgttaccctcgagactggc
cgtatcgcccgtcaagcctccggcgccgtgctggtcaccgttgatgacgacgtcagcgtg
ctggtcgccgtcaccggcgccaagacggccgatccgagcaagggcttcttcccgctgtcc
gtgcactatcaggaaaagacctacgcagccggcaagatccccggcggtttcttcaagcgt
gaagcgcgtccttccgagaaggaaaccctgacttcgcgcctgatcgaccgtccgatccgt
ccgctgttcccggaaggcttccagaacgaagtgcaggtcatctgcaccgtggtgtccacc
agcaagaagaccgatccggatatcgcggcgatgatcggcacctcggccgctctggccatc
tccggtatcccgttcaacggcccgatcggcgccgcacgcgtggctttccacccggaaacc
ggctacctgctgaacccgaactacgagcagctcaaggcttccagcctggacatggtcgtg
gccggcaccaaggacgctgtgctgatggtcgagtcggaagccaaagagctgaccgaagac
cagatgctgggcgccgtactgtttgcccatgaagaattccaggtggtcatccaggccgtt
gccgagctggccgccgaagccggcaagccgacctgggactggcagccgaagccggaaaac
accgcactgctgaatgccatccgtagcgagttcggcgaggcgatttcccaggcctatacc
atcaccgtcaagcaggaccgctacgcgcgtctgggcgagctgcgtgatcaggtcgtggcc
aagttctccggtgaagaaggtcagcctactgccggtgaagtcaaggaagccttcggcgag
atcgaataccgcaccgtgcgcgagaacatcgtcaacggcaaaccgcgtatcgatggccgt
gacacccgtaccgtgcgtggcctgaacatcgaagtcggcgttctggacaagactcacggt
tcggcgctgttcacccgtggcgaaacccaggcgctggtggttgcgaccctcggtaccgca
cgcgacgcacagctgctggacaccctcgaaggcgagaagaaagaccccttcatgctgcac
tacaacttcccgccgtactcggtcggtgagtgtggtcgcatgggcgccactggccgccgc
gaaatcggccacggccgtctcgcccgtcgtggcgttgccgccatgctgccgagcgctgac
gagttcccgtacaccatccgcgtagtgtcggaaatcaccgagtccaacggttcttcctcc
atggcttcggtgtgcggcgcttcgctggcgctgatggacgccggtgtgccgatgaaggcg
ccggttgccggtatcgccatgggtctggtgctcgaaggcgagaaattcgccgttctgacc
gacatcctcggtgacgaagatcacctgggcgacatggacttcaaagtagccggtaccgcc
aagggtgttaccgcgctgcagatggacatcaagatccagggcatcaccgaagagatcatg
gagcaggcgctggagcaggcgctggaagcgcgtctgaacatcctcggccagatgaaccag
gtcatcgcccagtcgcgcagcgagctgtcggccaacgcaccgaccatgatcgcgatgaag
atcgaccaggacaagatccgcgacgtcatcggcaagggtggcgccaccatccgcgcgatc
tgcgaagagaccaaggcgtcgatcgatatcgaagacgacggctcgatcaagatcttcggc
gaaaccaaggaagcggccgaggcggctcgtcagcgcgttctgggtatcaccgcagaagcc
gaaatcggcaagatctacgtcggcaaggtcgagcgcatcgtcgacttcggcgccttcgtc
aacatcctgccgggcaaggacggtctggtgcacatctccatgctgagcgatcagcgcgtg
gagaaggtcaccgacgtactgaaagaaggtcaggaagtgaaggtactggtactggacgtg
gacaaccgcggccgtatcaagctgtcgatcaaggacgtcgcggctgctgaggcctctggc
gtctaa
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