Pseudomonas wenzhouensis: J7655_19895
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Entry
J7655_19895 CDS
T07852
Name
(GenBank) DEAD/DEAH box helicase
Organism
pwz
Pseudomonas wenzhouensis
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HDA2-3
Motif
Other DBs
NCBI-ProteinID:
UFQ97500
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All DBs
Position
4278965..4283041
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AA seq
1358 aa
AA seq
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MKKSPVAFDALSFNYQLILFVLTPCFPGQNKTSLVKHLRAMGAHATSSRLIDNTSIEALI
NELVSAGWLTREEHNKQTLLCLQPRMRNPMLLRMFESPDRFALLKSHTDQLSAIDPWVAP
SSNRLMQDVWLSIIADDGEYLQQSLERLDDFLPTQQALKLHPFQQLLGDAAGKTLFERLS
LPVRQALLDDHLHLSSLLCAPAEQSYQLALRSLQQHGNPSLSLQVLLHALWRCDQATLDG
LFGDSKDLMQNVVTLFAKGALGDMLAVLRAWMAEVRKQTKKRKIDLPPILNALYCLALIQ
ENDPKQYPSLKQALQLGSKNGYAAAYNQLLDVLDLLQGSRPEHLYTLPPLVPGLDGLLLA
LALYWLDEPLAKQKAWHEALQRYAQQLRSNGYPWLAEQYKALISRQFGNSTAPLANGLAP
LVDLYQRKESWQLALNALSQIRAPAATGKSAESNSRLAWLIHMDRYTGLQLEPREQKLGA
KGQWSKGRPVALKRLLEEAASLDFLCDQDRQACRLIQSTSNYYGSREYYLPAPAALQCLA
GHSALYWQDAPDVRVDVCLGEAGLHLKEKNGQITLHLQPKGIGQGELLLEKETPTRLKIY
PVSKELRQIAEILGGGLTVPLSAKAQLVDAIGSIAPLLPIHSDIPELAANVEERPADTRL
YAHLLPLAEGLRLQLLVRPLTSGSWFRPGQGSERLLGEHEGRTVQVVRVLKQERQALQRV
LDACPSLAGAEYDGQEWQLQQPQDALQLLSELQTIDSDQLECVWPEGERMRIKGRREIQQ
LKLGLKLTGDWFQLQGGLTLDDGKVLQLRQLLELLKASPGRFIKLGDNDWLALGNSLRKR
LDELAHLAERVNDDGLHLSPLTTPLLAELAEEAGEFKAGQDWQAHLQRLQSLRDYQPSVP
STLQAELRDYQVEGFNWLARLAHWGVGACLADDMGLGKTVQTLALLLLRATQGPQLVVAP
TSVALNWLNEAQRFAPTLQVRNYNQQRSLEGLGPRDLLITSYGLLQQDAEAFTAVSWASA
VLDEAQAIKNAQTKRSQAAMALQADFRMVATGTPLENHLGELWNLMRFINPALLGSQESF
AQRFANPIENGDAGARRALKQLIQPFILRRLKSQVLDELPARTEITYSVPLSDGEALQYE
ALRQQAVEKLNASSDKDNQPLQVLAEITRLRRFCCHPSLVIPGSPLASSKLAAFQAIVSE
LLENRHKALVFSQFVDHLSIVRRWLDERGIAYQYLDGSTPAKARQAAVDAFQSGSGEIFL
ISLKAGGSGLNLTAADYVIHLDPWWNPAVEDQASDRAHRMGQQRPVTIYRLVTENTIEQQ
IVALHGRKRDLADSLLDGGEVSGKLDADALLQLLKGEA
NT seq
4077 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaatcgcccgttgctttcgatgccttgagcttcaattaccagctcattttgttc
gtcctgacgccctgctttccagggcagaacaaaacctcactggtcaagcacttgcgagcc
atgggtgcccatgcgaccagctcgcgcctgatcgataacaccagcattgaggcgctaatc
aatgagttggtgagcgcgggctggctgacccgtgaggagcacaacaagcagacgttgctg
tgcctgcaaccgcgcatgcgtaacccgatgctgctgcggatgttcgagtcgccggatcgc
ttcgccctgctcaagagccacacggatcaactgagcgccatcgacccttgggtagccccc
agtagcaatcggctcatgcaggatgtgtggctgtcgatcatcgccgacgatggagaatat
ctgcagcagtcactggagcggctcgacgatttcttgccgactcaacaggcgctgaaactg
cacccgttccagcaactgctgggtgacgcagccggcaagacgttgttcgagcgcctatcg
ctgcctgtacgtcaggcgctgctggatgaccatctgcacttgtcctccttgctctgcgcg
cccgccgagcagagctaccaactggccttgcggagcctgcagcagcacggcaatccaagc
ctcagcttgcaggtgctgctgcacgccctgtggcgctgcgaccaagcgacgctggacggg
ctgttcggcgactcgaaagacctcatgcaaaacgtcgtcaccctgttcgccaaaggcgcg
ctgggcgacatgctcgccgtcctacgcgcctggatggccgaggtgcgcaagcaaaccaag
aagcgcaagatcgacctgccgccaatactcaatgccttgtactgcctggcactgattcag
gagaacgatcccaagcaatacccctcactcaagcaagccttgcaactgggcagcaagaac
ggctacgcagcggcctacaaccagttgctggatgttctagacctgctgcaaggcagccgc
ccggaacacttgtacacccttccccccttggtgcctggcttagatggcctgctgctggcc
ctggcgctgtactggctggacgagccgctggccaagcagaaggcctggcacgaagccttg
cagcgatatgcccaacaactgcgcagcaatggttatccatggctggccgaacaatacaaa
gcgctgatcagccgccagttcggcaatagcacggcgcccctggccaatggcctagcgccg
ctggtcgacctctaccaacgcaaagagagctggcaactggcgctcaacgccctgagccag
atccgagccccagccgccactggcaagagtgccgaaagcaactcacgcctggcctggctg
atccacatggatcgctacacaggcctacaactcgaaccgcgcgagcaaaaactcggcgcc
aagggccagtggagcaagggtcgccccgtggcactcaagcgcctgctcgaagaggccgcc
agcctagactttctctgcgaccaggatcgccaggcttgtcgtctgatccagtccaccagc
aactactacggcagccgcgaatactacctaccggcgccagccgcgttgcagtgtttggca
ggccattcggccttgtactggcaggatgcaccggatgtgcgcgtagatgtctgcctgggt
gaagctggcctgcacctcaaggaaaagaacggtcagatcaccctgcacctgcaacctaaa
gggattggccagggcgagttgctgctggaaaaggaaacccccacacggctgaaaatctat
cccgtcagcaaggagctgcggcagatcgccgagatcctgggcggcggcctgacggttccc
ttgtcagccaaggcgcaactggtagacgccatcggcagcattgccccactgctgcccatc
cattcggacatccccgagctggccgcaaacgtcgaggaacgccccgccgacacgcgtctg
tacgcccacctgttgcccctggccgaaggtttacgcctgcaactgctggtgcgcccgctc
acctcgggtagctggttccgccctggccaaggcagcgagcgcctgctcggcgagcatgag
ggccgaaccgtacaggtggtgcgagtgttgaaacaggaacgacaagccctgcaacgcgtg
ctcgacgcctgcccgagcctggcaggcgccgagtatgacggccaggaatggcaactgcag
caaccgcaagatgccctgcaactactcagcgaactgcaaaccatagacagcgaccagctc
gaatgcgtctggccggaaggcgagcgcatgcgcatcaagggtcgccgtgaaatccagcag
ctcaagctcggcctcaaactgacaggcgactggttccagttgcagggcggtttgaccctc
gacgatggcaaggtgctgcaactgcgccagttgctggagctgctcaaggccagccctggg
cgcttcatcaagcttggcgacaacgactggctggccctcggcaacagcctgcgcaaacgc
ctggacgaactggcccacctggccgaacgggtcaacgacgacggcctgcacctcagcccg
ctgaccactccactgctcgccgaactggccgaagaggccggcgaattcaaggccggccag
gactggcaggcacacctgcaacgcctgcaatcactgcgtgattaccagcccagcgtgccc
agcaccctgcaggccgaattgcgtgactaccaggtggaaggcttcaactggctggcgcgc
ctggcgcactggggtgtcggcgcctgcctggccgatgacatgggcctgggcaaaaccgtg
cagactctcgccctgctcctgctgcgagccacgcaaggcccacaactggtggtggcgccc
acttcggtcgccctcaactggctcaacgaagcgcagcgtttcgccccgaccctgcaggtg
cgcaactacaaccagcaacgcagcctcgaaggcctcggcccacgcgacctgctgatcacc
agctacggcctgctgcaacaggatgccgaggccttcaccgccgtgtcctgggccagcgcg
gtactggacgaagcacaagcgatcaagaacgcccagaccaagcgctcccaagctgccatg
gcactgcaggccgacttccgtatggtggccaccggcacgccgctggaaaaccacctcggc
gagctgtggaacctcatgcgcttcatcaaccccgctctgctcggcagccaggaaagcttc
gcccaacgcttcgccaaccccatcgaaaatggtgatgcaggcgcccgccgcgccctcaag
caactgatccagccgttcatcctgcgccgcctgaaaagccaggtgctcgacgaattgcca
gcgcgcaccgaaatcacctacagcgtaccgctatccgacggcgaggccctgcaatacgaa
gccctgcgccaacaggcagtggaaaaactcaatgcctccagcgacaaggacaaccaaccg
ttgcaggtgctggcggaaattacccgactgcgacgcttctgctgccatccgtcgctggtc
attcccggctcgcccctggccagcagcaaactcgcggcattccaggccatcgtcagcgaa
ctgctggaaaaccgtcacaaggcgctggtgttcagccaattcgtcgaccacctgagcatc
gtccgtcgctggctcgatgagcgcggcatcgcctatcagtacctcgacggctcgacaccg
gccaaggcccgtcaggctgccgtggacgccttccagagcggcagcggcgaaatcttcctg
atcagcctcaaggctggcggcagcggcctcaacctgaccgctgccgactacgtcatccac
ttggacccctggtggaacccagccgtggaagaccaggccagcgaccgcgcccaccgcatg
ggccagcagcgcccagtgacgatttaccgcctggtgacggagaacaccatcgagcaacag
atcgtcgcgttgcacgggcgcaaacgcgacctggccgacagcctgctcgacggcggcgaa
gtcagcggcaagcttgacgcagacgccctgctgcaactgctcaagggcgaagcgtga
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