Pseudomonas wenzhouensis: J7655_20245
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Entry
J7655_20245 CDS
T07852
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
pwz
Pseudomonas wenzhouensis
Pathway
pwz00521
Streptomycin biosynthesis
pwz00523
Polyketide sugar unit biosynthesis
pwz00525
Acarbose and validamycin biosynthesis
pwz00541
Biosynthesis of various nucleotide sugars
pwz01055
Biosynthesis of vancomycin group antibiotics
pwz01100
Metabolic pathways
pwz01110
Biosynthesis of secondary metabolites
pwz01250
Biosynthesis of nucleotide sugars
Module
pwz_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
pwz00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
J7655_20245 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
J7655_20245 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
J7655_20245 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
J7655_20245 (rfbB)
00525 Acarbose and validamycin biosynthesis
J7655_20245 (rfbB)
Enzymes [BR:
pwz01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
J7655_20245 (rfbB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
3Beta_HSD
NAD_binding_4
adh_short
KR
NAD_binding_10
Motif
Other DBs
NCBI-ProteinID:
UFQ97562
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All DBs
Position
4353168..4354229
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AA seq
353 aa
AA seq
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MRILITGGAGFIGSALIRHLIHHTGHEVLNLDKLTYAGNLESLAPVADSPRYRFVHADIA
DSERVAASLAEFQPDAIMHLAAESHVDRSIDGPAAFIQTNIVGTYSLLESTRAYWLGLSA
ERKAAFRFHHISTDEVYGDLHGVDDLFSETTSYAPSSPYSASKAASDHLVRAWQRTYGLP
VLITNCSNNYGPYHFPEKLIPLMILNALAGKPLPVYGNGQQVRDWLYVEDHARALLQVVT
NGKVGETYNIGGHNEQKNLDVVKAICALLEELAPEKPAGIGRYEDLITYVQDRPGHDLRY
AIDAGKIERELGWVPQETFATGLRKTVQWYLDNLDWCRRVQDGSYQGQRLGAL
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgcgcattcttattaccggcggtgccggcttcatcggttcggcgctaatccgccatctg
atccatcataccgggcatgaggtgctcaacctcgacaagctgacctacgccggcaacctg
gagtcgctcgcgccggtggccgatagtccgcgctatcgcttcgttcacgccgatatcgct
gacagcgaacgagtcgccgcaagcctggccgagtttcagcccgacgccatcatgcacctg
gctgccgaatcccacgtcgaccgttccatcgatggcccggctgcgtttatccagaccaat
atcgtcggcacctacagcctgctggaaagcacccgcgcctattggcttggcctgagtgcc
gagcgcaaggcggcgtttcgctttcatcacatctccaccgacgaggtgtacggcgatctg
catggtgtcgatgacctgttcagcgagaccacgtcctacgcacccagctcaccttactcg
gcgagcaaggcggcgtccgatcatctggtgcgtgcctggcagcgcacctatggcctgccg
gtgttgatcaccaactgctcgaacaactacggcccctatcattttcccgagaagctgatc
ccgctgatgatcctcaatgccttggcgggcaaaccgctaccggtgtatggcaacgggcag
caggtacgcgactggctgtacgtggaggatcacgcgcgtgctctgctgcaggtggttacc
aacggtaaggtcggcgaaacctacaacatcggcgggcacaacgagcagaagaatctcgat
gtggtgaaagccatctgcgcgctactggaagagctggcacccgagaaaccagcgggtatc
ggccgttacgaagacctcatcacctatgtgcaggatcgcccaggccatgacctgcgctac
gctatcgacgccggcaagatcgaacgcgagctgggctgggtaccgcaagagaccttcgca
acaggcctgcgcaagacggtgcagtggtacctggataacctcgactggtgccgccgcgtg
caggatggcagttatcagggtcagcgactcggcgccctctaa
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