Pseudomonas xanthosomatis: KSS93_00530
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Entry
KSS93_00530 CDS
T07606
Symbol
tssM
Name
(GenBank) type VI secretion system membrane subunit TssM
KO
K11891
type VI secretion system protein ImpL
Organism
pxa
Pseudomonas xanthosomatis
Pathway
pxa02025
Biofilm formation - Pseudomonas aeruginosa
pxa03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pxa00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
KSS93_00530 (tssM)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
KSS93_00530 (tssM)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pxa02044
]
KSS93_00530 (tssM)
Secretion system [BR:
pxa02044
]
Type VI secretion system
Imp/Vas secretion system core components
KSS93_00530 (tssM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IcmF-related_N
IcmF-related
IcmF_C
IcmF_helical
Motif
Other DBs
NCBI-ProteinID:
QXH46441
LinkDB
All DBs
Position
complement(118522..122028)
Genome browser
AA seq
1168 aa
AA seq
DB search
MKAFFSFVIRWVIPVLGLLALSLIIWFVGPLLDALVPATPRVVLIVLLFAVWVSYRVWRV
IQARRQAAKVMESLAAETAPDPASVATAEELATLRQRMDEALVLLKKARLGGDERRNLYE
LPWYVIIGPPGSGKTTALVNSGLHFPLAAQLGEGAIRGVGGTRNCDWWFTDQAVLLDTAG
RYTTQDSHAQVDKAAWLGFLDLLKSQRSRRPIDGAFIAISLSDLLLGSDAERAAHAAAIR
TRIQELYSQLGVRFPIYLMLTKLDLVPGFMEFFDNLGKEERAQVWGMTFALDDGQHGDGP
LAQFSNEFGLLEQRLNQRLVERLQQERDPARRDLVYGFVQQFAALRGNLKSFLDGVFKPN
AFEERALLRGVYLTSGTQEGSPIDRLIGSMAQSMGLDRAHLARQNGTGRSYFIEKLFSAV
AFAERGLVGSNPKVEQRRKWLARGALALSVALVLVVGSLWAVSYRANQQYIAEVDSRLKP
VGKSVQELSPAQRNVLEVLPLLNAVRRLADDPPGWAEGLGLYQGDMLEGESQSVYRKLLI
AIFAPRLVTRIEEQLYAGGPSDYLYEGLKAYLMLADGEHYDPEFIKAWVTLDWERSLPRD
LAPDMRQALEQHLAALFDKRPPNARLDQRLIDDTRRQLQQLPVAQRVYDRVKRQKLPAGV
SDFRVSDAAGRDAALVFRFKSGKPLSEPLPGIFSVEGYRKAFLAASLAQATTLAEERWVL
GREPGEAGDAKRLADDVLQLYYQDYIRHWDALLADLDFVPITSVGQAADVLRVLSGPTSP
MKKLLQAVAHETDLSQPTTLDKVKDKAEQAGVDQLRQRLGGLLGDTPLASDNPAARQLDP
VTEHFAEVAALVATGEGQPAAIDGLLTDLNTLYVQVSAMVGASGDALLGEAKNQAQAAAQ
RVALGAARQPKVVQNLVSSVLGSTHNIVMGGVRSQLNAAWTSEVVNVYRQSLSGRYPLVA
GSSRDATLEDFGQFFGVGGVMDNYFRKYLQPYVNTSSSPWSWQPGAAQKLGINSNVLATF
QRAASIRDAFFRNTSGLQPGVRFELKPVAMDASITQFLLDLDGQQVSYDHGPSRPVALQW
PNPNSIGVVRLSVTPPLASGRSGLTVEGPWAWFRLLDQSDLVAGNSPERFNLRLRVDGAS
VSYELRASSAFNPFRSRVVSGFSLPERL
NT seq
3507 nt
NT seq
+upstream
nt +downstream
nt
gtgaaggcgtttttcagttttgtcattcgctgggtgatcccggtactgggcctgctggcc
ctgagcctgatcatctggttcgtcggcccgctgctggacgcgctggtgccggccacccca
cgggtggtgctgatcgtgttgctgttcgcggtgtgggtcagctatcgcgtgtggcgggtg
atccaggcccgccgccaggccgccaaggtgatggagagcctggctgccgaaaccgcgccc
gaccctgccagcgtggccaccgccgaagagctcgccaccctgcgccagcgcatggacgaa
gccctggtgctgctgaaaaaggcgcgcctgggcggtgacgagcggcgcaacctgtacgag
ctgccgtggtacgtgatcatcggcccgcccggctcgggcaagaccaccgcgctggtgaat
tccggcctgcacttcccgctggccgcgcaactgggcgagggcgccatccgtggcgtgggc
ggcacgcgcaactgcgactggtggttcaccgaccaggccgtgctgctggacaccgccggg
cgctacaccacccaggacagccacgcgcaagtggacaaggccgcctggctgggctttctc
gacctgctcaagagccagcgctcgcgccggcccattgatggcgcgttcatcgccatcagc
ctgtccgacctgctgctgggcagcgacgccgagcgtgccgcccatgccgcggccattcgc
acgcgtatccaggagctgtacagccagctgggagtgcgcttcccgatctacctgatgctg
accaagctcgacctggtgccgggcttcatggagtttttcgacaacctgggcaaggaagag
cgcgcccaggtgtggggcatgaccttcgccctggacgacggccagcacggcgacggcccg
ctggcgcagttcagcaatgagttcggcctgctcgaacagcgcctgaaccagcgcttggtc
gaacgcctgcaacaagagcgcgacccggcgcggcgcgatttggtgtacggcttcgtgcag
cagttcgcggccctgcgcggcaacctgaaaagcttcctcgacggcgtgttcaagcccaac
gccttcgaagagcgcgccctgctgcgcggggtgtacctgaccagcggcacccaggaaggc
agccccatcgaccgcctgatcggcagcatggcccagagcatgggcctggaccgcgcgcac
ctggcgcggcagaacggcaccgggcgcagctacttcatcgagaagctgttcagcgccgtg
gccttcgccgagcgcggtttggtgggcagcaacccgaaagtcgagcagcggcgcaagtgg
ctggcccgtggcgccctggccctgagcgtggccctggtgctggtggtcggcagcctgtgg
gcggtgagctaccgcgccaaccagcagtacatcgccgaggtggacagccgcctcaagccg
gtgggcaagagcgtgcaggagctgagcccggcgcagcgcaacgtgctcgaggtgctgccg
ctgctcaacgccgtgcgccgcctggccgacgacccgcccggctgggccgagggcctgggc
ctgtaccagggcgacatgctcgaaggcgaatcgcaaagcgtgtaccgcaagctgctgatc
gccatcttcgccccgcgcctggtcacccgcatcgaggagcagctgtacgccggcggcccc
tccgactacctgtacgagggcctcaaggcctacctgatgctggccgacggcgagcactac
gaccccgagttcatcaaagcctgggtcaccctggactgggaacgcagcctgccccgcgac
ctggccccggacatgcgccaggccctggagcagcacctggcggcgctgttcgacaagcgc
ccgcccaacgcccgcctggaccagcgcctgatcgacgacacccgccgccagctgcagcaa
ctgccggtggcgcagcgcgtgtacgaccgggtcaaacgccagaagctgcccgccggcgtg
agcgattttcgcgtcagcgatgccgccgggcgcgatgctgcgctggtgttccgcttcaag
agcggcaagccgttgagcgagccgctgccgggcatcttcagcgtcgagggctatcgcaag
gcattcctggctgccagccttgcgcaggccaccaccctggccgaagagcgctgggtgttg
ggccgcgagccgggcgaggcgggggatgccaaacgcctggcggatgacgtgctgcagctg
tattaccaggactacatccgccactgggatgccctgctggctgacctggactttgtgccc
atcaccagcgtcggccaggccgccgatgtgctgcgggtgctgtccgggccgacttcgccg
atgaaaaaactgctgcaggcggtggcccatgaaaccgacctgtcccagcccaccaccctc
gacaaggtcaaggacaaggccgagcaggccggcgtcgaccagttgcgccagcgtttgggc
ggcctgctgggcgatacgccactggccagcgacaaccccgctgcgcgccagctggacccg
gtaaccgagcacttcgccgaagtggctgcgctggttgcaaccggcgaaggccagcccgcg
gccatcgacggcttgctcaccgacctgaacacgctgtacgtgcaggtgagcgccatggtc
ggggccagtggcgatgcgctgctgggcgaggccaagaaccaggcccaggccgccgcgcag
cgggtggccctgggtgcggcgcgccagcccaaggtggtgcagaacctggtcagctcggtg
ctgggctcgacccacaacatcgtcatgggcggggtgcgcagccagctcaacgccgcctgg
accagcgaggtggtcaacgtctaccgccagtccctgagcggccgctacccgttggtggcc
ggcagctcgcgggacgccaccctcgaagacttcggccagttctttggcgttggcggggtg
atggacaactacttccgcaagtacctgcaaccctacgtcaacacctccagcagcccctgg
agctggcagccgggggctgcgcaaaagctcggcatcaacagcaacgtgctggccaccttc
cagcgtgcggcgagcatccgcgatgcgttcttccgcaacaccagcggcctgcaaccgggg
gtgcgcttcgagctcaagccggtggcgatggacgccagcatcacccagttcctgctcgac
ctcgacggccagcaggtcagctacgaccacggcccgagccgcccggtggcgctgcagtgg
cccaaccccaacagcatcggcgtggtgcgcctgtcggtaaccccgcctctggccagcggc
cgttccgggctgaccgtggaagggccgtgggcgtggttccgcctgctcgaccagtcggac
ctggtggccggcaactcgcccgaacgcttcaacctgcgcctgcgcgtcgatggcgccagc
gtgtcttacgagctgcgtgccagcagcgccttcaacccgttccgcagccgagtggtcagc
ggtttcagcctgccggagcgcctgtga
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