Pseudomonas xanthosomatis: KSS93_00560
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Entry
KSS93_00560 CDS
T07606
Symbol
tssB
Name
(GenBank) type VI secretion system contractile sheath small subunit
KO
K11901
type VI secretion system protein ImpB
Organism
pxa
Pseudomonas xanthosomatis
Pathway
pxa02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pxa00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
KSS93_00560 (tssB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pxa02044
]
KSS93_00560 (tssB)
Secretion system [BR:
pxa02044
]
Type VI secretion system
Imp/Vas secretion system core components
KSS93_00560 (tssB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T6SS_VipA
HTH_NPRL3
Motif
Other DBs
NCBI-ProteinID:
QXH46447
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All DBs
Position
128245..128760
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AA seq
171 aa
AA seq
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MAKDSSQKFIARNRAPRVQIEYDVELYGAEKKVQLPFVMGVLSDLAGKPAEPLPAVADRK
FLEIDVDNFDSRLKAMKPRVAFNVPNELTGEGNLSLDITFESMDDFSPAAVARKVDALNQ
LLEARTQLANLLTYMDGKTGAEDIILKAIKDPALLQALASAPKPADSEPSA
NT seq
516 nt
NT seq
+upstream
nt +downstream
nt
gtggcgaaagacagctcccagaaattcatcgcgcgcaaccgcgcgccgcgcgtgcagatc
gagtacgacgtcgaactgtacggcgccgagaagaaggtccagctgccgttcgtcatgggc
gtgctgtcggacctcgccggcaagccggccgagccgctgccggcggtggccgaccgcaag
ttcctggaaatcgacgttgacaacttcgactcgcgcctcaaagccatgaagccacgggtg
gcgttcaacgtgcccaacgagctgaccggtgaaggcaacctgagcctggacatcaccttc
gagagcatggacgacttcagcccggccgccgtggcgcgcaaggtcgatgccctgaaccag
ctgctcgaggcccgcacccagctggccaacctgctgacctacatggacggcaagaccggc
gccgaggacatcatcctcaaggccatcaaggacccggccctgctgcaggccctggccagc
gccccgaaacccgccgattccgagccgagcgcctga
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