Pseudomonas xanthosomatis: KSS93_00565
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Entry
KSS93_00565 CDS
T07606
Symbol
tssC
Name
(GenBank) type VI secretion system contractile sheath large subunit
KO
K11900
type VI secretion system protein ImpC
Organism
pxa
Pseudomonas xanthosomatis
Pathway
pxa02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pxa00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
KSS93_00565 (tssC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pxa02044
]
KSS93_00565 (tssC)
Secretion system [BR:
pxa02044
]
Type VI secretion system
Imp/Vas secretion system core components
KSS93_00565 (tssC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VipB
VipB_2
BMFP
TssC
Motif
Other DBs
NCBI-ProteinID:
QXH46448
LinkDB
All DBs
Position
128772..130265
Genome browser
AA seq
497 aa
AA seq
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MNDPLRETQAQQTATQDPSEFANLLLQEFKPKTERAKEAVESAVRTLAEQALAQTNLVSN
DAIGSIEQIIAAIDQKLTAQVNQIIHHDDFQQLESAWRGLHYLVNNTESDEQLKIRVLNI
SKNDLHRTLKKFKGTAWDQSPVFKKLYEEEYGQFGGEPYGCLVGDYYFDQSPPDVELLGE
MSKVCASMHAPFISAASPTVMGMGSWQELSNPRDLTKIFTTPEYAGWRSLRESEDSRYIG
LTMPRFLARLPYGAKTDPVEAFAFEEDTDGADSSKYTWANAAYAMAVNINRSFKYYGWCS
RIRGVESGGEVQGLPAHTFPTDDGGVDMKCPTEIAISDRREAELAKNGFMPLLHKKNTDF
AAFIGAQSLQKPAEYDDPDATANANLAARLPYLFATCRFAHYLKCIVRDKIGSFKEKDEM
QRWLQDWILNYVDGDPAHSTETTKAQHPLAAAEVVVEDVEGNPGYYNSRFYLRPHYQLEG
LTVSLRLVSKLPSAKGA
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgaacgacccattgcgcgaaacccaggcccagcaaacggccacccaggacccaagcgag
ttcgcaaacctgctgctgcaggagttcaagcccaagaccgaacgcgccaaggaagccgtc
gagagcgccgtgcgcaccctcgccgagcaggccctggcgcagaccaacctggtgtccaac
gatgccatcggctcgatcgagcagatcatcgccgccatcgaccagaagctcaccgcgcag
gtgaaccagatcatccaccacgacgacttccagcagctggaaagcgcctggcgtggcctg
cactacctggtcaacaacaccgagagcgacgagcagctgaaaatccgcgtgctcaacatc
tcgaagaacgacctgcaccgcaccctgaagaagttcaagggcaccgcctgggaccagagc
ccggtgttcaagaagctctacgaagaagaatacggccagttcggcggcgagccttacggc
tgcctggtgggcgactactacttcgaccagtcgccgcccgacgtggaactgctgggcgag
atgtccaaggtttgcgcctcgatgcacgcgccgttcatcagcgccgcgtcgccgacggtg
atgggcatgggttcgtggcaggagctgtccaacccgcgcgacctgaccaagatcttcacc
accccggaatacgccggctggcgttcgctgcgtgagtcggaagactcgcgctacatcggc
ctgaccatgccgcgcttcttggcccgcctgccctatggcgccaagaccgacccggtggaa
gccttcgccttcgaagaagacaccgacggcgccgacagcagcaagtacacctgggccaac
gctgcctacgccatggcggtgaacatcaaccgttcgttcaagtactacggctggtgctcg
cgcatccgcggcgtggagtcgggcggcgaagtgcagggcctgccggcccacaccttcccc
accgacgacggcggcgtggacatgaagtgcccgaccgagatcgccatttccgaccgccgc
gaggcggagctggcgaagaacggcttcatgcccctgctgcacaagaagaacaccgacttt
gccgccttcatcggcgcccagtcgttgcagaagccggccgaatacgacgacccggacgcc
accgccaacgccaacctggctgcgcgccttccgtacctgttcgccacctgccgcttcgcc
cattacctgaagtgcatcgttcgcgacaagatcggctcgttcaaggaaaaggacgagatg
cagcgctggctgcaggactggatcctcaactacgtcgacggcgacccggcgcactccacc
gagaccaccaaggcccagcacccgctggcggccgccgaagtggtggtcgaggacgtcgaa
ggcaacccgggttactacaactcgcgcttctacctgcgcccgcactatcagctcgaaggg
ctgaccgtgtcgctgcgcctggtgtcgaagctgccttcggccaaaggggcctga
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