Pseudomonas xanthosomatis: KSS93_02215
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Entry
KSS93_02215 CDS
T07606
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pxa
Pseudomonas xanthosomatis
Pathway
pxa03420
Nucleotide excision repair
pxa03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pxa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
KSS93_02215 (uvrD)
03430 Mismatch repair
KSS93_02215 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pxa03400
]
KSS93_02215 (uvrD)
Enzymes [BR:
pxa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KSS93_02215 (uvrD)
DNA repair and recombination proteins [BR:
pxa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KSS93_02215 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
KSS93_02215 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
AAA_12
AAA_11
AAA_22
DUF5681
Motif
Other DBs
NCBI-ProteinID:
QXH46756
LinkDB
All DBs
Position
complement(509146..511329)
Genome browser
AA seq
727 aa
AA seq
DB search
MHTDDLSLLLNSLNDAQRQAVAATLGRQLVLAGAGSGKTRVLVHRIAWLIQVEGASPHSI
LSVTFTNKAAAEMRQRIEQLLGINPAGMWVGTFHGLAHRLLRAHWQEAGLVQNFQILDSD
DQQRLIKRVMREMGLDEQKWPARQAQWFINGQKDEGLRPRHIQAGGDLFLGTMRDIYANY
EQACERAGVIDFSELLLRALDLWRDQPGLLEHYQRRFQHILVDEFQDTNAVQYAWLRLLG
AGGRSLMAVGDDDQSIYGWRGAKIENIHQYTADFPDAEMIRLEQNYRSTGGILKAANALI
ANNSGRLGKELWTDMGEGEPLTLYAAYNEHDEARYVVETIESLVKQGNARNEIAILYRSN
AQSRVLEEALLRERIPYRIYGGQRFFERAEIKNAMAYLRLLEGRGNDAALERVINVPPRG
IGEKTVEAIRDHARHAQLSMWQAMCQLLAAKALKGRAASALGAFIELIENLASKVADMPL
HLMTQTVIEQSGLIIYHQEEKGEKGQARVENLEELVSAARNFETSEEDADLSPLSAFLGH
ASLEAGDTQADEHEDSIQLMTLHSAKGLEFPYVFLVGMEEGLFPHKMSLEEPGRLEEERR
LAYVGITRAMRQLIMTYAETRRLYGSETYNKVSRFVREIPAGLVQEVRLSNTVSRPFGGA
KAPASSLFANANIPQTAFNLGQRVQHAVFGEGVILNFEGSGAQARVQVNFDEGSKWLMLG
YAKLEAL
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgcataccgatgacctctccctcctgctgaactccctcaacgacgcccaacgccaggcc
gtagcggccacgctggggcgccaactggtgctggccggcgccggctccggcaagacccgc
gtgctggtgcaccgcatcgcctggctgattcaggtcgaaggggcctcgccgcactcgatc
ctgtcggtgacctttaccaacaaagccgccgccgaaatgcgccagcgtatcgagcaactg
ctgggcatcaaccccgccggtatgtgggtgggcaccttccacggcctggcccaccgcctg
ctgcgcgcgcactggcaggaagccgggctggtgcagaacttccagattctcgacagcgac
gaccagcagcgcctgatcaagcgggtcatgcgtgaaatgggcctggatgagcaaaagtgg
cctgcccgccaggcccagtggttcatcaacgggcagaaggacgaaggcctgcgcccgcgc
catatccaggccggcggcgacctgttcctgggcaccatgcgcgacatctacgccaactac
gagcaggcctgcgagcgcgccggggtcatcgacttctccgaactgctgctgcgtgccctg
gacctgtggcgcgaccagcccggtttgctggagcactaccagcgccgcttccagcacatt
ctggtggacgaattccaggataccaacgccgttcagtacgcctggttgcgcctgctcggt
gccggcgggcggagcctgatggcggtgggcgacgacgaccagtcgatctacggctggcgc
ggcgccaagatcgagaacattcaccagtacacggccgacttccccgacgccgagatgatc
cgcctggagcagaactaccgctccaccggcggcatcctcaaggccgccaacgccttgatc
gccaacaacagcgggcgcctgggcaaggagctgtggaccgacatgggcgaaggcgagccg
ctgacgctgtacgccgcctacaacgagcacgacgaagcgcgctacgtggtcgaaaccatc
gaaagcctggtcaagcagggcaatgcgcgcaacgaaatcgccatcctgtaccgctccaac
gcccagtcgcgggtgcttgaagaggcgctgctgcgcgaacgcatcccgtaccgcatctat
ggcggccagcgcttcttcgagcgcgccgaaatcaagaacgccatggcctacctgcgcctg
ctcgagggccgtggcaacgacgcggcactggagcgggtgatcaacgtgccgccacgcggc
atcggcgaaaaaaccgtcgaagccatccgcgaccacgcccgccacgcgcagctgtcgatg
tggcaagccatgtgccagctgctggccgccaaggccctcaaaggccgcgccgccagcgcc
ctgggtgcgttcatcgagctgatcgagaacctcgccagcaaggtcgccgacatgccgctg
cacctgatgacccagacagtcatcgagcagtccgggctgatcatctaccaccaggaagaa
aagggcgaaaaaggccaggcccgggtagaaaaccttgaggaactggtcagtgccgcgcgc
aacttcgaaaccagcgaagaagacgccgacctgtcgccgctgtcggcgttcctcggccac
gcctcgctcgaggccggcgacacccaggccgacgagcacgaagacagcatccagctgatg
accctgcacagcgccaagggcctggaattcccctacgtgttcctggtgggcatggaagag
gggctgttcccgcacaagatgagcctggaagagccaggccgccttgaagaggaacgccgc
ctggcctacgtcggcatcacccgggccatgcgccagctgatcatgacctacgccgagacc
cgccggctgtatggcagcgaaacctacaacaaggtgtcgcgcttcgtacgcgagattccg
gccgggctggtacaggaagtgcgcctgtccaacaccgtcagccgcccgttcggcggcgcc
aaggcgccggccagcagcctgttcgccaacgccaacattccgcagaccgccttcaacctt
ggccagcgcgtgcagcatgcggtgttcggcgagggcgtgatcctcaacttcgaaggctcc
ggcgcccaggcccgggtgcaggtgaacttcgacgaaggcagcaagtggctgatgcttggc
tacgcaaaactcgaggccctgtag
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