Pseudomonas xanthosomatis: KSS93_03130
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Entry
KSS93_03130 CDS
T07606
Symbol
gabD
Name
(GenBank) NADP-dependent succinate-semialdehyde dehydrogenase
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
pxa
Pseudomonas xanthosomatis
Pathway
pxa00250
Alanine, aspartate and glutamate metabolism
pxa00310
Lysine degradation
pxa00350
Tyrosine metabolism
pxa00650
Butanoate metabolism
pxa00760
Nicotinate and nicotinamide metabolism
pxa01100
Metabolic pathways
pxa01120
Microbial metabolism in diverse environments
Module
pxa_M00957
Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
pxa00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
KSS93_03130 (gabD)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
KSS93_03130 (gabD)
00310 Lysine degradation
KSS93_03130 (gabD)
00350 Tyrosine metabolism
KSS93_03130 (gabD)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
KSS93_03130 (gabD)
Enzymes [BR:
pxa01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
KSS93_03130 (gabD)
1.2.1.20 glutarate-semialdehyde dehydrogenase
KSS93_03130 (gabD)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
KSS93_03130 (gabD)
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GFIT
Motif
Pfam:
Aldedh
Motif
Other DBs
NCBI-ProteinID:
QXH46926
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Position
703198..704640
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AA seq
480 aa
AA seq
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MQLKDAQLFRQQAFINGEWLDADSGQTIKVTNPATGEVIGTVPKMGAAETRRAIEAADKA
LPAWRALTAKERAGKLRRWFELMIEHQDDLARLMTTEQGKPLAEAKGEIAYAASFIEWFA
EEAKRVYGDVIPGHQPDKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLK
PASQTPYSALALVELATRAGIPAGVLSVITGSAGEVGSELTGNSLVRKLSFTGSTEIGRQ
LMEECAKDIKKVSLELGGNAPFIVFDDADLDKAVEGAIISKYRNNGQTCVCANRIYVQDG
VYDAFAEKLAAAVAKLKIGNGLEEGTTTGPLIDGKAVAKVQEHIQDAVSKGAKVLSGGKL
IEGNFFEPTILVDVPKTAAVAKEETFGPLAPLFRFKDEAEVIAMSNDTEFGLASYFYARD
MSRVFRVAEALEYGMVGINTGLISNEVAPFGGIKASGLGREGSKYGIEDYLEIKYLCLSI
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgcagctcaaagacgctcagttgttccgccagcaagccttcatcaacggtgagtggctg
gatgcggacagcggtcagaccatcaaggtgaccaacccggctaccggtgaagtgatcggt
accgtgccgaagatgggcgccgccgaaacccgccgcgccatcgaggccgccgacaaggcc
ctgccagcctggcgtgcactgaccgccaaagagcgtgccggcaagctgcgccgctggttc
gagctgatgatcgagcaccaggacgacctggcccgcctgatgaccaccgaacagggcaag
ccgctggccgaagccaagggcgaaatcgcctatgccgcctcgttcatcgagtggttcgcc
gaagaagccaagcgcgtttacggcgatgtcatcccgggccaccagccagacaagcgcctg
atcgtcatcaagcagccgatcggcgttaccgctgccatcaccccgtggaacttccctgcg
gcaatgatcacccgtaaagccggcccggccctggccgccggttgcaccatggtgctcaag
cctgcttcgcagaccccgtactccgccctggccctggtcgagctggctacccgtgccggc
atcccggctggcgtgctcagcgtcatcaccggcagcgccggcgaagtgggttcggagctg
accggcaactccctggtacgcaagctgtccttcaccggctccaccgaaatcggtcgccag
ctgatggaagagtgcgccaaggacatcaagaaggtctcgctggagctgggtggcaacgcc
ccgttcatcgtgttcgacgacgccgacctggacaaggcggtcgagggcgcgatcatctcc
aagtaccgcaacaacggccagacctgcgtttgcgccaaccgtatctacgtgcaggacggc
gtctatgacgcgttcgccgagaagctggccgctgctgttgccaagctcaaaatcggtaac
ggcctggaagaaggcaccaccaccggcccgctgatcgacggcaaggccgtggccaaggtc
caggagcacatccaggacgcggtctccaaaggcgccaaggtgctgtccggcggcaagctg
atcgaaggcaacttcttcgagccgaccattctggtcgacgtgccgaaaaccgccgctgtc
gccaaggaagagaccttcggcccactggcgccgctgttccgcttcaaggacgaggctgaa
gtcatcgccatgtccaacgacaccgagttcggcctggcctcgtacttctacgcccgcgac
atgagccgcgtgttccgcgttgccgaagccctggaatacggcatggtgggtatcaacacc
ggcctgatctccaacgaagtggcgccgttcggtggcatcaaggcctcgggcctgggccgc
gaaggttccaagtacggcatcgaggactacctcgaaatcaaatacctgtgcctgagcatc
tga
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