Pseudomonas xanthosomatis: KSS93_05150
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Entry
KSS93_05150 CDS
T07606
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pxa
Pseudomonas xanthosomatis
Pathway
pxa03030
DNA replication
pxa03430
Mismatch repair
pxa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pxa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KSS93_05150
03430 Mismatch repair
KSS93_05150
03440 Homologous recombination
KSS93_05150
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pxa03032
]
KSS93_05150
03400 DNA repair and recombination proteins [BR:
pxa03400
]
KSS93_05150
Enzymes [BR:
pxa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KSS93_05150
DNA replication proteins [BR:
pxa03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KSS93_05150
DNA repair and recombination proteins [BR:
pxa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KSS93_05150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
QXH47316
LinkDB
All DBs
Position
complement(1186085..1186795)
Genome browser
AA seq
236 aa
AA seq
DB search
MNLLAWLRPPAPELPDSLRQRIKALPAPAPLAVCSLREQRWVVLDLETSGLNLNRDQVLS
IGAVAIEDGAIDLGHPFERTLCRPEQKTNPSVLIHGLGPSALAAGEDPAEALLELLTFIG
DSPVLAFHAPFDQRMLARALKDSLGLRLQHPFFDVAELAPLLNPDTVLREAGLDDWIARF
GLEVAARHHASADAQVTAELALILFSQARRQQLDSPLQLEQRLKQWRRRKVQGHGL
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atgaacctgctcgcctggctgcgcccgcctgcccctgaactgcccgatagcctgcgccag
cgcatcaaggccctgcctgccccggcgccgctggcggtgtgctcgctgcgtgaacagcgc
tgggtggtgctggacctcgaaaccagcggcctgaacctgaaccgcgaccaggtgctgtcg
attggcgcggtggccatcgaagacggtgccatcgacctcggccacccgttcgagcgcacc
ctgtgccgccccgagcagaagaccaaccccagcgtgctcatccacggccttgggcccagt
gccctggccgcaggcgaagaccccgccgaggcgctgctggaactgctgacgttcatcggc
gacagcccggtgctggcctttcacgccccgttcgaccagcgcatgctggcccgcgcgttg
aaggacagcctgggcctgcgcctgcagcacccgttcttcgacgtggccgagctggccccg
ctgctcaaccccgacaccgtgctgcgcgaagccgggctggacgactggatcgcccgcttc
ggcctggaagtcgctgcccgccaccacgccagcgccgacgcccaggtgaccgcggaactg
gccctgatcctgttcagccaggcccgccgccagcagctcgacagcccgctgcaactggaa
cagcgcctcaaacagtggcgccggcgcaaggtccagggccacgggctgtaa
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