Pseudomonas xanthosomatis: KSS93_06655
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Entry
KSS93_06655 CDS
T07606
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
pxa
Pseudomonas xanthosomatis
Pathway
pxa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pxa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
KSS93_06655 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pxa03400
]
KSS93_06655 (recC)
Enzymes [BR:
pxa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
KSS93_06655 (recC)
DNA repair and recombination proteins [BR:
pxa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
KSS93_06655 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Jas_motif
Motif
Other DBs
NCBI-ProteinID:
QXH47595
LinkDB
All DBs
Position
1496654..1500124
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AA seq
1156 aa
AA seq
DB search
MQEADSLKPGLMVIHGNRLDDLRELAVSWMKRYPLAPLENEVVLVHSNGIAQWLKLALAE
DPHNGGCGIAAALDVQLPARFLWQVYRGVLGAQTTPQSSPLDKAALSWRLMRLLPNLLNN
PAFASLQRFLEKDDEQRKMHQLCERLADLFDQYQVYRADWLEDWAAGHDQLRHIKGTAQP
LDAPNLWQAQLWREVLADVGEGALEQSRAGVHKRFVARLRSADLAPKGLPRRVVVFGISS
MPAQVLEALKELSRYSQVLLCVHNPCRHHWGDIVADKDLLAHHYRRQPARDVAAVANEHG
QPLLAAWGKQGRDYINLLDYHDEPGSYRHLLDGLNGGRIDLFTEPDTATLLGQLQSDILE
LRPLPETREAWGPVDVTDDRSLRFHVVHSMQREVEVLHDQLLARFSADKQLSPRDVIVMV
PDINAYTPHIEAVFGQVPRNDPRYLPFTVADQGQRGRQPLLIALEHLLKLPHSRFAASDI
LDLLDVPALRARFAINEADVPVLQRWIDGAGVRWGLDAEQRESLGMPAGLEQNTWRFGMR
RMLLGYAAGRAPQLNGIEPYDEVSGLEAALAGPLLTLLDHLEVALQELQQLATPVQWAER
LQALLKVFFRPVSDGEELLLNQLLKLLEGWLRTCEVAQFAQPLPLSVVHEAWLSGVEDGG
LSQRFLAGAVNFCTLMPMRAIPFKVVCLLGMNDGDYPRQQSPVDFDLMRNDYRPGDRSRR
EDDRYLLLEALLSARKQLYVSWVGRNIRDNSERVPSVLIGQLRDHVASGWRLANGQPLLP
ALTQEHPLQPFSVAYFANEPGPDGLFTYSSEWREVHDEHTSQPADDRLPALVQDTPLSLR
QLSEFVRDPVGAFFSQRLKVNFDDDELVNRDDEAFQLDGLENWQHQDRLTQALKRWVEEA
YDPEQAVIELDLQVKRLQREGALPLGGFGTLSASELVEPMPGLLARYHAQLQAWPELEEG
QSAAAIDATDDLPALKDWLGGIRRNALRERAYLQLDSKKLCSDDSLRWQHLVRPWLRHLA
LQLNGPACKTILVGLNGDVEFRPVPEQQAREQLQALLQAWVAGMQEPLPVACESAFAWLA
AGGESNENRGSAYDKARDVYDGGYMNKGEVERSFAQRRAYPDFDQLCASGKFAAWAKHLY
GGLYAHFTSTDAGSDQ
NT seq
3471 nt
NT seq
+upstream
nt +downstream
nt
atgcaggaagcagattctttgaagcccgggttgatggtgattcacggcaaccgcctcgat
gaccttcgcgaattggcggtgagctggatgaagcgctacccgctggcgccgctggaaaac
gaagtggttctggtgcacagcaacggcatcgcccagtggctgaaacttgcgctcgccgaa
gacccgcacaacggcggctgcggcattgctgcagcgctggatgtgcagttgccggcgcgc
tttctttggcaggtgtatcgcggggtgcttggggcgcagaccacgccgcagtcctcgccg
ctggacaaggccgcgctgagctggcggctgatgcgcctgttgcccaacttgctcaataac
ccggctttcgcaagcctgcagcgctttctggaaaaggacgatgaacagcgcaagatgcac
caactgtgcgagcgactggcggacttgtttgaccaataccaggtataccgcgccgattgg
ctggaagattgggctgccgggcacgatcaactgcgacacatcaagggcactgcgcagccc
ttggatgcgccgaacctatggcaggcgcagctatggcgcgaggtgctggccgatgttggc
gagggcgcgcttgaacaaagccgcgctggggttcacaaacgcttcgtcgctcgcctgcgc
agcgctgacctggcgccgaaagggctgccacgcagggtggtggtgttcggcatttcctcg
atgcctgcgcaggtgctcgaagccctgaaagagctttcccgctacagccaggtgctgctg
tgcgtgcacaatccttgccggcaccactggggcgatatcgtcgccgacaaagatttgctg
gcgcaccactaccgtcgccaacctgcccgagatgttgccgcagttgcgaacgagcacggc
caacccttactcgccgcctggggcaaacaggggcgagactacatcaacctgctcgactac
cacgatgagcccggcagttatcgtcacctgctcgacggcctcaacggcgggcgtatcgac
ctgtttaccgagccagatacggcaaccctgttgggccagttgcaaagcgacattcttgaa
ctgcgcccactgccggaaacccgcgaagcctgggggcctgtagatgttactgacgaccgt
tcgctgcgttttcacgtggtgcacagcatgcagcgtgaagtggaagtgctgcacgaccaa
ctgctcgcccgcttcagcgccgataagcagttgagcccacgggatgtgatcgtgatggta
ccggacatcaacgcctacacccctcacatcgaggcggtgttcggccaggtgccaagaaac
gacccgcgctacctgccgtttaccgtagccgaccaaggccagcgcggccgccagccgctg
ctgatcgccctggaacacctgctcaagctgccccacagccgcttcgctgccagcgacatt
ctcgacctgctggacgtaccggccttgcgcgcacgtttcgcgatcaacgaagccgacgta
cccgtcctgcagcgctggatcgacggtgccggtgtgcgttgggggcttgatgccgagcag
cgcgaaagcctgggcatgccggcgggcctcgagcagaacacctggcgctttggcatgcgg
cgcatgttgctgggctacgccgctgggcgagcgcctcagctcaacggcatcgaaccctac
gacgaagtgtcggggctggaggctgccctggccgggccgctgctgaccttgctcgaccac
ttggaagtcgcccttcaggagctccagcagctagccacgccggtgcaatgggcagagcgc
ctgcaagccttgttgaaagtgttcttccgcccggtgagcgacggcgaagagttgttgctc
aaccaattgctcaagctgctcgaaggttggttgcgcacctgcgaggtggcgcagttcgcg
cagccattgccgctgagtgtggtgcacgaggcctggctcagcggtgtcgaggatggcggc
ctgtcgcagcgtttcctggccggcgcggtgaatttctgcacgctgatgccgatgcgggcg
attccgttcaaggtggtgtgcctgttgggcatgaacgatggcgactacccacgccagcaa
tcgccggtcgatttcgacctgatgcgcaacgactaccgccctggcgaccggtcacgacgt
gaagatgaccgctacctgttgctggaggccttgctgtcggcccgcaagcagctgtatgtg
agctgggtgggccgcaacatccgcgacaatagtgagcgcgtgccctcggtgctgatcggc
cagttgcgcgaccatgtggccagcggctggcgcttagccaacggccagccgctgctgcca
gcgctgacccaggagcacccgctgcaacccttcagcgtcgcgtacttcgccaacgagccg
gggcctgatggcttgttcacctactccagcgagtggcgcgaggtccatgacgaacacacc
tcgcagccagcggacgatcgtttgccagcgctggtgcaggacacgccgttgagccttcgg
caactttctgagtttgtgcgcgacccggtgggcgcctttttcagccagcggttgaaggtc
aacttcgacgatgatgagttggtcaaccgcgatgacgaagccttccaactcgatggcctg
gaaaactggcagcatcaggacaggctcacccaggcgctcaagcgctgggtcgaggaggct
tacgaccccgaacaggccgtgatcgaactggacctgcaagtaaaacgcctgcaacgcgag
ggcgccttgccgctggggggcttcggcaccttgagtgcctcggaactggtggagccgatg
ccgggcctgctagcgcggtaccacgcccaactgcaagcctggcctgagcttgaagagggc
cagagcgccgccgccattgacgccaccgacgaccttcccgccctcaaggactggctgggt
ggtattcgccgcaacgcgttgcgtgagcgagcgtacttgcaactggacagcaagaagctg
tgtagcgacgacagcctgcggtggcaacacctggtgcggccttggttgcgccaccttgcg
ttgcagttgaacgggcctgcctgcaagacaattttggtgggcttgaatggcgatgtggag
ttccggccagtgcctgagcaacaggctcgggagcaattgcaagcgctgctccaggcctgg
gtggcgggcatgcaagagccactgccagtggcctgcgaaagtgccttcgcctggttggcc
gcgggtggggaaagcaacgaaaacaggggttcggcctacgacaaagcgcgcgacgtttac
gacggcggctacatgaacaagggtgaagtggaacgctcgtttgcccagcggcgtgcctac
cccgacttcgaccaactgtgcgcgagcggcaagttcgcggcctgggccaagcacttgtat
ggcggcttgtacgcccacttcacctcgaccgacgcagggagcgaccaatga
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