Pseudomonas xanthosomatis: KSS93_06665
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Entry
KSS93_06665 CDS
T07606
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
pxa
Pseudomonas xanthosomatis
Pathway
pxa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pxa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
KSS93_06665 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pxa03400
]
KSS93_06665 (recD)
Enzymes [BR:
pxa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
KSS93_06665 (recD)
DNA repair and recombination proteins [BR:
pxa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
KSS93_06665 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
RecD_N
AAA_30
UvrD_C_2
Viral_helicase1
AAA_11
SH3_13
Helicase_RecD
AAA_22
UvrD-helicase
Mg_chelatase
PhoH
AAA_17
SLFN-g3_helicase
T2SSE
AAA_28
AAA_25
AAA_16
nSTAND3
NTPase_1
UvrD_C
Motif
Other DBs
NCBI-ProteinID:
QXH47597
LinkDB
All DBs
Position
1503798..1505885
Genome browser
AA seq
695 aa
AA seq
DB search
MSQTLKQLSSSQGDTEQVAVFVGAASNSELLQQLDTWVARGWLRALDRALAKFILEQDPQ
AQASVLLAAAMTSHQLGRGHACLDLAATLAAPDFVLSLPPEGEEGSTLPSQWLQGLDATQ
WRQALAASTLVEDRDACQDAPERPLVLAGQRLYLRRYWNYECSIAQALSARLSVAPVTPD
NLASRLDELFPTRSEAERAQGSNWQKIACALAARGNFSIITGGPGTGKTTSVVRLLGLLQ
TPAVESGKPLRIRLAAPTGKAAARLSESIGKEVRALPVSDAVRAEIPTDVATLHRLLGSR
PNSRNFVHQRDKPLELDVLVVDEASMIDLEMMACVLDALPQVARLILLGDKDQLASVEAG
SVMGDLCREAEKGDYNAQTAQWLNTHSGEALLDPELQMAEGAGAPLAQQTVMLRRSWRFD
PQKGIGRLAKLINKKQAGEARRVLEQPSEQLFNLLVRGEQDAALTDLAIDGNRNAPGYRH
YLEQLRDLRPAPDTAWDSERWAEWAGKVLFAFDQFRLLCALRRGPWGVEGLNQRVATQLR
RCGLLDSDHGWYEGRPVLVTRNDYSLNLMNGDIGIVLCVPGPEGAQALRVAFPRNDGSGG
VRFVMPSRLVEVETVFAMTVHKSQGSEFTHTALVLPDALNPVLTKELLYTAITRARKWFS
LAETHPEVFEGAVGRNVQRTSGLALQLHEALAQRT
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atgagccagaccctcaagcaactgagcagcagtcagggtgataccgagcaggtggctgta
ttcgtaggcgcggccagcaacagcgagctcttgcagcaactcgatacctgggttgcgcgt
gggtggctgcgtgcgctggatcgtgcgttggcgaagttcatcctcgaacaagaccctcaa
gcccaggcaagcgtgctgctggccgccgcgatgaccagccaccaactgggtcgtggccac
gcctgcctggacctggccgccacgctggcagccccggatttcgtactgtcgttgccacct
gaaggcgaggagggcagcacactgccgtcgcaatggctgcaaggtctggatgctacgcag
tggcgccaggcgctggccgccagcaccctagtcgaggaccgcgatgcctgccaggacgct
cccgagcggcccttggtgctggcggggcagcgcctgtacttgcgccgttactggaactac
gagtgcagcatcgcccaagccttgagcgctcgcttgagcgtggcgcccgtcaccccggat
aacctcgccagtcgcctcgacgagctgttccccactcgctccgaagccgagcgcgcgcaa
ggtagcaactggcagaaaattgcctgcgcgctggcggcccggggcaacttcagcatcatc
accggcgggccaggtacaggcaagaccacctctgtggtgcgcctgctgggcctgttgcaa
accccggcggtcgagagcggcaagccgctgcgtattcgcctggcggcgccgaccggcaag
gcggcggcgcggttgtccgaatccattggcaaggaagttcgggcgttgccggtgagtgac
gcggtacgcgccgagataccgacggatgtggcaaccttgcaccgcttgctgggcagccga
ccgaactcgcgcaacttcgttcaccagcgcgacaaaccgctggagttggatgtgctggtg
gtcgatgaagcctcgatgatcgacttggaaatgatggcctgcgtgttggatgccttgccc
caggtggcgcgcttgattctgttgggcgacaaggatcagttggcgtcggtggaggccggt
tcggtgatgggcgacctgtgccgcgaggctgaaaagggcgactacaacgcgcaaaccgcc
cagtggctgaatacccatagcggtgaggcgctgctcgaccctgagttgcagatggccgaa
ggcgctggcgccccgttggcgcagcagaccgtgatgttgcgccgctcgtggcgcttcgac
ccgcagaagggtatcgggcgcctggccaagctgatcaacaaaaagcaggctggcgaagca
cgacgagtgctcgaacagccatcggagcagcttttcaacctgctggtgcgtggagaacag
gatgccgcgcttaccgacctggccatcgatggtaaccgcaatgcgcccggctaccggcat
tacctggagcaactgcgcgacctgcgccccgcacctgacacggcgtgggacagcgagcga
tgggcggaatgggcgggcaaggtgttgtttgcattcgaccagttccgtctgctctgcgca
ttgcgccgggggccttggggcgtcgaggggttgaaccagcgtgtggccacccagttgcgt
cggtgtggtttgctggacagcgaccacggctggtacgaagggcgaccggtattggttacg
cgcaatgactacagcttgaacctgatgaacggcgacatcggcatcgtgctatgtgtgccg
gggccagaaggtgcgcaggccctgcgcgtggcgttcccacgcaacgacggcagtggcggc
gtgcgttttgtgatgccgagccggttggtggaggtggaaacggtgttcgccatgacggtg
cataagtcccagggctcggagttcacccataccgcgctggtgttgcccgatgcgctgaac
ccggtgttgaccaaggagctgctgtacaccgccatcactcgcgcgaggaagtggttcagc
ctggccgagactcacccagaggtgttcgaaggcgcggtgggccgcaatgtgcagcgcacc
agtggcttggcgttgcaactgcacgaggctctggctcaacgcacctga
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