Pseudomonas xanthosomatis: KSS93_06970
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Entry
KSS93_06970 CDS
T07606
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pxa
Pseudomonas xanthosomatis
Brite
KEGG Orthology (KO) [BR:
pxa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pxa03016
]
KSS93_06970 (truB)
Enzymes [BR:
pxa01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
KSS93_06970 (truB)
Transfer RNA biogenesis [BR:
pxa03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
KSS93_06970 (truB)
Prokaryotic type
KSS93_06970 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
PUA_3
Motif
Other DBs
NCBI-ProteinID:
QXH47653
LinkDB
All DBs
Position
1577979..1578896
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AA seq
305 aa
AA seq
DB search
MAQVKRIRRNVSGIILLDKPLGFTSNAALQKVRWLLNAEKAGHTGSLDPLASGVLPLCFG
EATKFSQYLLDSDKGYETVMQMGQTTTTGDAEGEVLKTREVTVGRADIEAVIPRFRGQIQ
QIPPMYSALKRDGQPLYKLARAGEVVEREARSVTIGRLELLECEGTRARLSVGCSKGTYI
RTLVEDMGEALGCGAYVAELRRTQAGPFELAQTVTLEELEAAHAEGGNEALDRFLMPSDS
GLQDWPLVLLSEHSSFYWLHGQAVRAPDAPQFGMVRVQDHNGRFIGIGEVSEDGRIAPRR
LIRSE
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
gtggcccaggtcaaacgtatccgccgcaacgtcagcggcatcatcctgctcgacaagccg
ctggggttcacctccaacgccgcgctgcaaaaagttcgctggttgcttaacgcggaaaag
gccggccacaccggcagcctcgacccgctggccagtggtgtgctgccgctgtgcttcggt
gaagccaccaagttctcgcagtacctgctcgattccgacaagggctacgagacagtgatg
cagatgggccagaccaccactaccggggatgctgaaggcgaagtcctgaagacccgcgag
gtgaccgttggtcgcgccgacatcgaggcggtgatcccgcgttttcgcgggcagatccag
cagataccgccgatgtactcggccctcaaacgcgatggccagccgctgtataaactggcg
cgtgcaggggaagtagtggagcgcgaggcgcgttctgttactattggccggcttgaactg
ctcgagtgcgaaggcacccgtgcacgcctgtcggttggctgcagcaaaggcacctatatc
cgtacgctggtcgaggatatgggcgaggcgttgggctgtggtgcctacgtcgccgaattg
cgccgtacccaggcaggccccttcgaactggcgcagaccgtcaccctcgaagagctcgaa
gcggcccacgccgaaggtggcaacgaagcgctcgatcgcttcctgatgccgtccgacagc
gggctgcaagactggccgctggtgctgttgtccgagcacagttcgttttactggctgcat
ggccaggcagtacgcgccccggatgccccacagttcggcatggtccgggtgcaggatcac
aatggtcgcttcatcggtatcggtgaagtgagcgaagacgggcgcattgcgccgcgtcgg
ctgattcggtcggaatga
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