KEGG   Pseudomonas xanthosomatis: KSS93_08665
Entry
KSS93_08665       CDS       T07606                                 
Name
(GenBank) sigma-54 dependent transcriptional regulator
  KO
K10126  two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
Organism
pxa  Pseudomonas xanthosomatis
Pathway
pxa02020  Two-component system
Brite
KEGG Orthology (KO) [BR:pxa00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    KSS93_08665
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:pxa02022]
    KSS93_08665
Two-component system [BR:pxa02022]
 NtrC family
  DctB-DctD (C4-dicarboxylate transport)
   KSS93_08665
SSDB
Motif
Pfam: Sigma54_activat Response_reg Sigma54_activ_2 HTH_8 AAA_5 FleQ AAA HTH_50 AAA_2 MCM
Other DBs
NCBI-ProteinID: QXH47962
LinkDB
Position
complement(1940026..1941357)
AA seq 443 aa
MLNSVIVVDDEASIRAAVEQWLSLSGFSVQLFARAEECLAQLPDNFPGVILSDVRMPGLS
GMQLLERLQQQDPGLPVILLTGHGDVPMAVEAMRNGAYDFLEKPFTPQHLMSSLGRALEK
RQLVLENRRLHEQADLKAQLETTLLGMSQGLQQLRRQVLDLAGLPVNVLIRGETGSGKER
VARCLHDFGPRAGKPFVALNCAAIPEALFEAELFGHESGAFTGAQGKRIGKLEYANGGTL
FLDEIESMPLAQQAKLLRVIQEHKLERLGANQSIEVDLRIIAATKPDLLEEARAGRFRED
LAYRLNVAELRLAPLRERREDIPLLFEHFARACAERLGRSAPAPSGAQLAQLLAHDWPGN
VRELANAAERHALGLGSPDLAPVNEGQSLSDQVEAFEAQCLRAALRQHKGEIKGVMEALQ
LPRRTLNEKMQRHGLVREDFLEG
NT seq 1332 nt   +upstreamnt  +downstreamnt
atgttgaattcagtgatcgtcgtcgatgacgaagccagtatccgcgcagcggtggagcag
tggctgagcctgtccgggttcagcgtgcagctgttcgcccgcgccgaagaatgcctggcg
caattgccggacaacttccccggggtgatcctcagcgatgtgcgcatgccggggctgtcg
ggcatgcaactgctcgaacgcctgcagcagcaagacccgggcctgccggtgattctgctg
accggccacggcgacgtgcccatggcggtggaagccatgcgcaacggggcgtatgacttc
ctcgaaaaacccttcaccccgcagcacctgatgagcagcctcggccgcgccctggaaaaa
cgccagttggtgctggaaaaccgccgcctgcacgagcaggccgacttgaaggcccagctc
gaaaccaccctgctcggcatgtcccagggcctgcagcaactgcgccggcaggtgctggac
cttgccggcctgccggtcaacgtgctgatacgcggcgaaaccggcagcggcaaggagcgt
gtggcccgctgccttcacgatttcggcccgcgcgccggcaagcccttcgtcgccctcaac
tgtgccgccattcccgaagcgctgttcgaagccgagctgttcggtcacgagagcggcgcc
ttcaccggcgcccagggcaagcgcatcggcaagctggagtacgccaacggcggcacgctg
ttcctcgacgagatcgagagcatgccgctggcccagcaagccaagctgctgcgggtgatc
caggagcacaagctggagcgcctgggcgccaaccagagcatcgaggtggatttgcggatc
atcgccgcgaccaagcccgacctgctcgaagaagcccgcgccgggcgttttcgtgaagac
ttggcctaccgcctgaacgtcgccgaactgcgcctggcaccgctgcgcgagcgccgcgag
gatatcccgttgctgttcgagcacttcgcccgcgcttgcgccgagcgcctggggcgcagc
gcccccgcgccgagcggtgcgcaactggcgcaactgcttgcccatgactggccgggcaac
gtgcgcgagctggccaacgccgccgagcgccatgccctggggctgggctcgccggacctg
gcgccggtcaacgaagggcaatccttgagcgatcaggtggaggcgttcgaggcccagtgc
ctgcgcgccgccctgcgtcaacacaagggcgagatcaagggggtgatggaggccctgcaa
ctgccaaggcgtacgctgaacgagaagatgcagcggcacgggctggtgcgtgaggatttt
ctcgaaggctga

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