Pseudomonas xanthosomatis: KSS93_09355
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Entry
KSS93_09355 CDS
T07606
Symbol
rapA
Name
(GenBank) RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
pxa
Pseudomonas xanthosomatis
Brite
KEGG Orthology (KO) [BR:
pxa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pxa03021
]
KSS93_09355 (rapA)
Transcription machinery [BR:
pxa03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
KSS93_09355 (rapA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapA_C
Tudor_1_RapA
Tudor_RapA
Helicase_C
SNF2-rel_dom
ResIII
DEAD
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
QXH48097
LinkDB
All DBs
Position
complement(2089012..2091858)
Genome browser
AA seq
948 aa
AA seq
DB search
MAQQYQPGQRWISDSEAELGLGTILAQDGRLLTVLYPATGDTRQYSLRNAPLTRVRFSPG
DQITHFEGWKLTVREVDDADGLLVYHGIDAQNVPRTLPETQLSNFIQFRLASDRLFAGQI
DPLSWFSLRYNTLQHTSKQMLSSLWGLGGVRAQPIAHQLHIAREVADRIAPRVLLADEVG
LGKTIEAGLVIHRQLLSGRASRVLILVPENLQHQWLVEMRRRFNLQVALFDAERFIESDA
SNPFEDAQLALVALEWLVDDEKAQDALFAAGWDLLVVDEAHHLVWHEEQASAEYALVEQL
AQVIAGVLLLTATPEQLGQDSHFARLRLLDPNRFHDLAAFRAESENYRPVAEAVQELLDE
GRLSPKAHATIQGFLGAEGEALLAAVSDGDTQASARLIRELLDRHGTGRVLFRNTRAAIQ
GFPERQLHPYPLANPEQYVALPAGERAELYPEVAFQAQGETSDDERWWRFDPRVDWLIDT
LKMLKRTKVLVICAHAETAMDLEDALRVRSGIPATTFHEGMSILERDRAAAYFADEEFGA
QVLICSEIGSEGRNFQFAHHLVMFDLPAHPDLLEQRIGRLDRIGQQHTIQLHIPYLQNSP
QERLFQWYHEGLNAFLNTCPTGNALQHQFGPRLLPLLAEGDDKAWSTLVADARGERERLE
AELHSGRDRLLELNSGGAGEGQELVEAILEQDDQFALPIYMETLFDAFGIDSEDHSENAL
VLKPSEKMLDASFPLGDDEGVTITYDRTQALSREDMQFLTWEHPMVQGGMDLVLSGSMGN
TAVALIKNKALKPGTVLLELLYVSEVVAPRSLQLGRYLPPAALRCLLDANGNDLGPRVAF
ETLNDQLESVPKASANKFIQAQRDVLAQRISAGEAKILPAHEARVAEAQQRLAAEADEEL
ARLTALKAVNPSVRDSEVDAVRKQREDGLAALTKAALRLEAIRVLVAG
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagcagtatcaaccggggcaacgctggatcagcgacagcgaagccgagctcggt
cttgggaccatcctggcgcaggatggccgcctgttgaccgtgctctacccggccacaggc
gacacccgccagtactcgctacgcaacgcgccgctgacccgcgtgcgcttctcgccgggc
gaccagatcactcacttcgagggctggaagctgaccgtgcgcgaagtcgacgacgccgac
ggcctgctggtctaccacggcatcgacgcgcagaacgtgccgcgcaccctgcccgagacg
caactgtcgaacttcatccagttccgcctggccagcgaccgcctgttcgccgggcagatc
gacccgctgtcgtggttctcgctgcgctacaacaccctgcagcacaccagcaagcagatg
ctctcctccttgtggggcctgggcggcgtgcgcgcccagcccatcgcccaccagttgcac
attgcccgtgaagtagccgaccgtatcgccccgcgcgtactgctggcagacgaagtgggc
ctgggcaaaaccatcgaagcgggccttgtgatccaccgccaactgctctcgggccgtgcc
agccgcgtgctgatcctggtaccggagaacctgcagcaccagtggctggtagaaatgcgc
cggcgcttcaacctgcaggtggcgttgttcgacgccgagcgcttcatcgaaagcgatgcc
agcaacccgttcgaagacgcccaactggccctggtggccctggaatggctggtggacgac
gaaaaggcccaagacgcgctgttcgccgccggctgggacctgctggtggtcgacgaagcc
caccacctggtctggcacgaagaacaggccagcgccgagtacgcgctggtcgagcaactg
gcccaggtcatcgcaggcgtgctgctgctcaccgccacccctgaacagctcggccaggac
agccacttcgcgcgcctgcgcctgctcgaccccaaccgcttccacgacctggccgcgttc
cgcgccgaaagcgagaactaccgcccggtggccgaagccgtgcaggagctgctcgacgaa
ggccgcctgtcgcccaaagcccacgccaccatccagggcttcctgggtgccgaaggcgaa
gcgctgctggccgcggtcagcgatggcgacacccaggccagcgcgcggctgatccgcgag
ctgctcgaccgccacggcaccggccgcgtgttgttccgcaacacccgcgccgccatccag
ggcttccccgagcgccagctgcacccctacccgctggccaaccccgagcaatatgtcgcg
ctgccggccggcgagcgcgccgagctgtacccggaagtggccttccaggcccagggcgaa
accagcgatgacgagcgctggtggcgcttcgacccgcgggtcgactggctgatcgacacc
ctgaagatgctcaagcgcaccaaggtgctggtgatctgcgcccacgccgaaaccgccatg
gacctcgaagacgcactgcgcgtgcgctccggcattcctgccacgaccttccacgaaggc
atgagcatcctcgagcgtgaccgcgccgccgcctacttcgccgacgaagaattcggcgcc
caggtgctgatctgctcggaaatcggcagtgaaggccgcaacttccagttcgcccaccac
ctggtgatgttcgacctgccggcccaccccgacctgctcgagcagcgcatcggccgcctc
gaccgtatcggccagcagcacaccatccagttgcacatcccgtacctgcaaaacagcccg
caagagcgcctgttccagtggtaccacgaaggcctcaacgcgttcctcaacacctgcccc
accggcaacgccctgcagcaccagttcggcccgcgcctgctgccgctgctggccgaaggc
gacgacaaggcctggagcacgctggtggctgatgcccgcggcgagcgcgagcgcctcgaa
gccgaactgcacagcggccgtgaccgcctgctggagctcaactccggcggcgccggcgaa
ggccaggagctggtcgaagccatcctggagcaggacgaccagttcgccctgcctatctat
atggaaaccctgttcgacgccttcggcatcgacagcgaagaccactccgagaacgctctg
gtgctcaagccgagcgagaagatgctcgacgccagcttcccgttgggcgacgacgaaggc
gtaaccatcacttacgaccgcacccaggcgctttcgcgcgaggacatgcagttcctcacc
tgggaacaccccatggtgcagggcggcatggacctggtgctgtccggctcgatgggcaac
accgccgtggcgctgatcaagaacaaagcgctcaagcccggtaccgtgctgctggagctg
ctgtacgtcagcgaagtggtagcgccgcgcagcctgcaactgggccgctacctgccaccg
gcagcgctgcgctgcctgctggacgccaacggcaacgacctgggcccgcgggtagccttc
gaaaccctcaacgaccagctcgaaagcgtgcccaaggccagcgccaacaagttcatccag
gcccagcgtgacgtgctcgcccagcgtatcagcgctggcgaagcgaagatcctgccggcc
cacgaggcccgcgtggccgaggcccagcagcgcctggccgccgaggccgacgaagagctg
gcgcgcctgaccgcgctcaaggccgtcaacccgagcgtgcgtgacagcgaagtcgatgcg
gtgcgcaagcagcgtgaagatggcctggcagcgctgaccaaagccgcgttgcggctcgag
gcgatccgcgtgctggtagccggctaa
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