KEGG   Pseudomonas xanthosomatis: KSS93_11220
Entry
KSS93_11220       CDS       T07606                                 
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit B
  KO
K03702  excinuclease ABC subunit B
Organism
pxa  Pseudomonas xanthosomatis
Pathway
pxa03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pxa00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    KSS93_11220 (uvrB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pxa03400]
    KSS93_11220 (uvrB)
DNA repair and recombination proteins [BR:pxa03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     KSS93_11220 (uvrB)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      KSS93_11220 (uvrB)
SSDB
Motif
Pfam: UvrB_inter UvrB_3rd UvrB Helicase_C ResIII UVR DEAD AAA_30 AAA_22 Viral_helicase1
Other DBs
NCBI-ProteinID: QXH48444
LinkDB
Position
2519048..2521063
AA seq 671 aa
MSEFQLVTRFQPAGDQPEAIRQMVEGIDAGLSHQTLLGVTGSGKTFSIANVIQQVQRPTM
VLAPNKTLAAQLYGEFKAFFPNNAVEYFVSYYDYYQPEAYVPSSDTFIEKDASINDHIEQ
MRLSATKALLERRDAIIVTTVSCIYGLGSPETYLKMVLHVDRGDKLDQRALLRRLADLQY
TRNEMDFARATFRVRGDVIDIFPAESDLEAIRIELFDDEVENIAAFDPLTGEVIRKLPRF
TFYPKSHYVTPRETLVEAVEGIKEELKDRLEYLHKHNKLVEAQRLEQRTRFDLEMILELG
YCNGIENYSRYLSGRPAGAPPPTLYDYLPADALLVIDESHVSVPQVGAMYKGDRSRKETL
VEYGFRLPSALDNRPMRFDEWESVSPQTIFVSATPGPYESEHAGRVVEQVVRPTGLVDPQ
VEVRPALTQVDDLLSEIGKRVAMGERVLATTLTKRMAEDLTDYLADHDVRVRYLHSDIDT
VERVEIIRDLRLGTFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIGRA
ARNLNGKAILYADNITGSMQRAIDETERRRDKQVAFNQANGIVPKGVVKDITDIMEGATV
PGARSKKRKGQAKAAEDAARAEAELQTPGDITKRIKQLEDKMFQFARDLEFEAAAQLRDE
IGKLRERLIAS
NT seq 2016 nt   +upstreamnt  +downstreamnt
atgtccgagttccagctcgtcacccgcttccagccggccggcgatcagcccgaggccatc
cgccagatggtcgaaggcatcgatgccggcctttcgcaccagacgctgctcggggtgaca
ggttcgggcaagaccttcagcatcgccaatgtcatccagcaggtgcagcgcccgaccatg
gtgctggcgcccaacaaaaccctggccgcgcagttgtacggcgagttcaaggcattcttc
cccaacaacgccgtcgagtacttcgtctcctactacgactactaccagccagaagcctac
gtgccgtcgtcggacaccttcatcgagaaggacgcctcgatcaacgaccatatcgagcag
atgcgcctgtcggcgaccaaggcgctgctggagcggcgcgacgcgatcatcgtcaccacc
gtgtcgtgcatctacggcctgggcagccccgagacttatctgaaaatggtcctgcacgtc
gaccgcggcgacaagctcgaccagcgcgccctgctgcgccggctggccgacctgcagtac
acccgcaacgagatggacttcgcacgcgccaccttccgtgtgcgtggcgatgtcatcgat
atcttccccgccgaatccgaccttgaggccatccgcatcgagctgttcgacgacgaggtg
gagaacatcgccgccttcgacccgctcaccggcgaagtcatccgcaagttgccgcgcttc
accttctaccccaagtcccactacgtcaccccgcgggaaactctggtcgaggcagtggaa
ggcatcaaggaagaactcaaggaccgcctggaatacctgcacaagcacaacaagctggtg
gaggcccagcgcctggagcagcgcacccgtttcgacctggaaatgatcctggagcttggc
tactgcaacggcatcgagaactactcgcgctacctctccgggcgcccggccggtgcgccg
ccgcccacgctgtacgactacctgccggcggatgcgctgctggttatcgacgagtcccac
gtcagcgtgccgcaggtgggggccatgtacaaaggtgaccgctcgcgcaaggaaaccctg
gtggaatacggcttccgcctgccgtcggcactggacaaccggcccatgcgtttcgatgag
tgggagtcggtcagcccgcagaccatctttgtctccgccaccccaggcccttacgagagc
gaacatgccggccgcgtggtcgagcaggtggtgcgccccaccggcctggtcgacccgcag
gtggaggtgcgcccggcgctcacccaggtggacgacctgctgtcggaaatcggcaagcgc
gtggccatgggtgagcgggtgctggccaccacgctgaccaaacgcatggccgaggacctc
accgattacctggccgaccacgacgtgcgcgtgcgctacctgcactcggacatcgacacc
gtcgagcgggtagagatcatccgcgacctgcgcctgggcaccttcgacgtgctggtgggc
atcaacctgctgcgcgagggcctggacatgcccgaggtgtcgctggtggccattctcgac
gccgacaaagagggtttcctgcgctccgagcgctcgctgatccagaccatcggccgcgcc
gcgcgcaacctcaacggcaaggcgattctgtacgccgacaacatcaccggctccatgcag
cgggccatcgacgagaccgaacgccggcgtgacaagcaggtggcgttcaaccaggccaac
ggcattgtgcccaagggcgtggtcaaggacatcaccgacatcatggaaggcgccaccgtg
cccggtgcgcgcagcaagaagcgcaagggccaggccaaggccgccgaggacgcggcgcgt
gcggaggccgagctgcaaaccccgggcgacatcaccaagcgcatcaagcagctggaagac
aagatgttccagttcgcccgcgacctggagttcgaggccgccgcgcagttgcgcgacgaa
ataggcaagctgcgcgagcggctgattgccagctaa

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