Pseudomonas xanthosomatis: KSS93_11525
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Entry
KSS93_11525 CDS
T07606
Name
(GenBank) exonuclease SbcCD subunit D C-terminal domain-containing protein
KO
K03547
DNA repair protein SbcD/Mre11
Organism
pxa
Pseudomonas xanthosomatis
Brite
KEGG Orthology (KO) [BR:
pxa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pxa03400
]
KSS93_11525
DNA repair and recombination proteins [BR:
pxa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
KSS93_11525
Archaeal homologous recombinant proteins
KSS93_11525
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
TIR_2
Motif
Other DBs
NCBI-ProteinID:
QXH48492
LinkDB
All DBs
Position
complement(2585539..2586777)
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AA seq
412 aa
AA seq
DB search
MRLFHTSDWHLGQSLHGQERDFEHACFFDWLLGQLRLRQPDALLIAGDIFDTVNPPVKAQ
ERLYDFIVQAHEQQPKLDIVMIAGNHDSGSRIELPAPLMRRLRTHALGRVHWLDEGQLDA
ERLLIPLTNARGKVEAWCLALPFLRPAEVTGPALGDDYLQGITQVHQQLIEAALKKRKKD
QALVAISHAHMAGGSISEDSERSLIIGNAEALPARLFDKAIGYVALGHLHKPQKVNREER
IRYSGAPIPLSFAEINYPHQVLEVELEGSQLVSVEPRLVPRAVALRRVGPAPLAELLEQL
ADLPVIDLLEDPNRQPWLEVRVLLDEPQPDLRQQIETALQGKAVRLVRISAEYAGSRREE
DEEQAFVELAQMTPQDLFGRAWQQAYGSAVDEQALADFAELLQDVLHEEEQP
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctgtttcacacctccgactggcacctgggccagagcctgcacggccaggaacgc
gacttcgaacatgcctgcttcttcgactggctgctgggccagttgcgcctgcgccagccc
gatgcgctgctgattgccggcgacatcttcgacaccgtcaacccgccggtcaaagcccag
gagcgcctgtacgacttcatcgtccaggcccacgagcaacagcccaagctggatatcgtg
atgatcgccggcaaccacgactccggctcgcgcatcgagctgccggcgccgctgatgcgc
cgcctgcgcacccacgccctgggccgggtgcactggctcgacgaaggccagctggatgcc
gagcgtttgctgataccgctgaccaacgcccgcggcaaggtcgaggcctggtgcctggcc
ctgcccttcctgcgcccggcagaggtgaccggcccggcgctgggggatgactacctgcag
ggcatcacccaggtgcaccagcaactgatcgaggcggcgctgaaaaagcgcaagaaggac
caggcgctggtggccatcagccacgcgcacatggccggcggcagcatcagcgaagactcc
gagcgcagcctgatcatcggcaacgccgaggcgctgccggcgcggctgttcgacaaggcc
atcggctatgtcgccctgggccacctgcacaagccgcagaaggtcaaccgcgaggagcgc
attcgctacagcggcgcgccaatcccgttgtcgttcgccgaaatcaactacccgcaccag
gtgctggaggtggagctggagggcagccaattggtcagcgtcgagccacgcctggtgccg
cgcgcggtggcgctgcgccgggtcgggccggcgccgctggccgagctgcttgaacagctt
gccgacctgccggtgatcgacctgctcgaagaccccaaccgccagccctggctggaggtg
cgcgtgctgctggatgaaccccagccagacctgcgccagcagatcgaaaccgccctgcag
ggcaaggccgtgcgcctggtgcgcatcagcgccgaatacgccggcagccgccgtgaggag
gacgaagaacaggccttcgtcgaactcgcccagatgaccccgcaggacctgttcggccgc
gcctggcaacaggcctacggcagcgccgtcgacgaacaggccctggccgatttcgccgag
ctgctgcaggacgtgctgcacgaagaggaacagccatga
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