Pseudomonas xanthosomatis: KSS93_11865
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Entry
KSS93_11865 CDS
T07606
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
pxa
Pseudomonas xanthosomatis
Pathway
pxa00071
Fatty acid degradation
pxa00280
Valine, leucine and isoleucine degradation
pxa00310
Lysine degradation
pxa00362
Benzoate degradation
pxa00380
Tryptophan metabolism
pxa00410
beta-Alanine metabolism
pxa00640
Propanoate metabolism
pxa00650
Butanoate metabolism
pxa00907
Pinene, camphor and geraniol degradation
pxa00930
Caprolactam degradation
pxa01100
Metabolic pathways
pxa01110
Biosynthesis of secondary metabolites
pxa01120
Microbial metabolism in diverse environments
pxa01200
Carbon metabolism
pxa01212
Fatty acid metabolism
Module
pxa_M00087
beta-Oxidation
pxa_M00957
Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
pxa00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
KSS93_11865 (fadB)
00650 Butanoate metabolism
KSS93_11865 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
KSS93_11865 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
KSS93_11865 (fadB)
00310 Lysine degradation
KSS93_11865 (fadB)
00380 Tryptophan metabolism
KSS93_11865 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
KSS93_11865 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
KSS93_11865 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
KSS93_11865 (fadB)
00930 Caprolactam degradation
KSS93_11865 (fadB)
Enzymes [BR:
pxa01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
KSS93_11865 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
KSS93_11865 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
KSS93_11865 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
KSS93_11865 (fadB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
NfeD1b_N
SDH_protease
Motif
Other DBs
NCBI-ProteinID:
QXH48555
LinkDB
All DBs
Position
2669257..2671404
Genome browser
AA seq
715 aa
AA seq
DB search
MIYEGKAITVKALESGIVELKFDLKGESVNKFNRLTLNELREAVAAIQADASVKGVIVSS
GKDVFIVGADITEFVDNFKLPEAELVAGNLEANRIFNAFEDLEVPTVAAINGIALGGGLE
MCLAADYRVMSSSAKIGLPEVKLGIYPGFGGTVRLPRLVGSDNAIEWIASGKENRAEDAL
KVGAVDAVVAPELLQAGALDLIKRAISGELDYKAKRQPKLEKLKLNAIEQMMAFETAKGF
VAGQAGPNYPAPVEAIKSIQKAANFGRDKALEVEAAGFAKLAKTSVAQSLIGLFLNDQEL
KRKAKAHDEIAHDVKQAAVLGAGIMGGGIAYQSAVKGTPILMKDIREQAIQLGLNEASKL
LGNRVEKGRLTPAKMAEALNAIRPTLSYGDFANVDIVVEAVVENPKVKQAVLAEVEGQVN
ENAILASNTSTISINLLAKALKRPENFVGMHFFNPVHMMPLVEVIRGEKSSEVAVATTVA
YAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVRIDKVMEKFGWPMGPAYL
MDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAVDALYEANRLGQKNGKGFYAYETDKRGKP
KKVFDATVLDVLKPVVFEQREVTDEDIINWMMVPLCLETVRCLEDGIVETAAEADMGLVY
GIGFPPFRGGALRYIDSIGVAEFVALADQYADLGPLYHPTAKLREMAKNGQRFFN
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgatttacgaaggtaaagccatcacggttaaggctcttgaaagcggcattgtcgaactg
aagttcgacctcaagggtgagtccgtcaacaagttcaaccgcctcacgctcaacgaactg
cgtgaagccgtcgccgccatccaggccgacgcttcggtcaagggcgtgatcgtcagcagc
ggcaaggacgtgttcatcgtcggcgccgacatcaccgaattcgtcgacaacttcaagctg
cccgaggccgaactggttgccggcaacctggaagccaaccgcatcttcaatgccttcgaa
gacctcgaagtgccgaccgtcgcggccatcaacggcatcgccttgggtggcggcctggaa
atgtgcctggcggcggactaccgggtcatgtccagcagcgccaagatcggcctgccggaa
gtcaagctgggcatctacccaggcttcggcggtaccgtgcgcctgccgcgcctggtcggc
tcggacaacgccatcgagtggatcgcttcgggcaaggaaaaccgcgccgaagacgccctc
aaagtcggcgccgtggacgctgtggtggcccccgagctgctgcaggccggtgccctggac
ctgatcaagcgcgccatcagcggcgagctggattacaaggccaagcgtcagcccaagctt
gagaagctcaagctcaatgccatcgagcagatgatggccttcgagaccgccaagggcttc
gtcgcaggccaggccggcccgaactacccggccccggtcgaagccatcaagagcatccag
aaggccgccaacttcggccgtgacaaggccctggaagtcgaagccgcaggctttgccaag
ctggccaagacctcggttgcgcaaagcctgatcggcctgttcctgaacgaccaggagctc
aagcgcaaggccaaggcccacgacgagatcgcccacgacgtgaagcaggccgccgtgctc
ggcgccggcatcatgggtggcggcatcgcctaccagtcggcggtcaagggcaccccgatc
ctgatgaaggatatccgtgagcaagccatccagctgggcctgaacgaggcctccaagctg
ctcggcaaccgtgtggagaagggccgcctgaccccggccaagatggccgaggcgctcaac
gccatccgcccgaccctgtcctacggcgacttcgccaacgtcgatatcgtcgtcgaggcc
gtggtcgagaacccgaaggtcaagcaagccgtgctggctgaggtggaagggcaggtgaac
gagaacgcgatcctcgcctccaacacctcgaccatctcgatcaacctgctggccaaggca
ctcaagcgcccggaaaacttcgtcggcatgcacttcttcaacccggtgcacatgatgccg
ttggtggaagtgatccgtggcgagaagtccagtgaagtggcggttgccaccaccgtggcc
tacgccaagaaaatgggcaagaacccgatcgtggtcaacgactgcccgggcttcttggtc
aaccgcgtgctgttcccgtacttcggcggcttcgccaagctggtcagtgccggtgtcgac
ttcgtacgcatcgacaaggtgatggagaagttcggctggcccatgggcccggcctacctg
atggacgtggtcggcatcgacaccggccaccacggccgcgacgtgatggccgaaggcttc
ccggaccgcatgaaggacgaccgccgctcggccgtcgacgccctgtacgaggccaaccgc
ctgggccagaagaacggcaagggcttctacgcctacgagaccgacaagcgcggcaagccg
aagaaagtcttcgacgccaccgtgctggacgtgctcaagccggtggtcttcgagcagcgt
gaagtcactgacgaggacatcatcaactggatgatggtgccgctgtgcctggagaccgtg
cgctgcctggaagacggcatcgtcgagaccgcagccgaagccgacatgggcctggtctac
ggtattggtttccctccgttccgcggtggcgcgctgcgctacatcgattcgatcggggtc
gccgagttcgttgcactggccgaccaatacgccgacctggggccgctgtaccaccccact
gcgaagctgcgcgaaatggccaagaacggccagcgcttcttcaactga
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