Pseudomonas xanthosomatis: KSS93_14620
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Entry
KSS93_14620 CDS
T07606
Name
(GenBank) OsmC domain/YcaO domain-containing protein
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
pxa
Pseudomonas xanthosomatis
Brite
KEGG Orthology (KO) [BR:
pxa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pxa03009
]
KSS93_14620
Ribosome biogenesis [BR:
pxa03009
]
Prokaryotic type
ribosomal protein modification factors
KSS93_14620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YcaO_C
YcaO
OsmC
Sin3a_C
Motif
Other DBs
NCBI-ProteinID:
QXH44135
LinkDB
All DBs
Position
3284851..3287043
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AA seq
730 aa
AA seq
DB search
MEIKVNFLDNLRLEAKFDDFTVIADQPIRYKGDGSAPGPFDYFLASSALCAAYFVKLYCQ
TRDIPTENIRLSQNNIVDPENRYNQIFKIQVELPEDISEKDRQGILRSIDRCTVKKVVQT
GPEFIIEQVDNLDADAQALLMPVSDSQTLIAGKDLPLEQTIANMSAILAGLGMKIEIASW
RNIVPNVWSLHVRDAQSPMCFTNGKGATKEAALASALGEFIERLNCNFFYNDQFWGEDIA
NAPFVHYPNEQWFLPGPKDALPAEILDEYCLEIFNPDGELRGSHLYDTNSGNKARGICSL
PFVRQSDGETVYFPSNLIENLYLSNGMSAGNTLAEAQVQCLSEIFERAVKREILEGELCL
PDVPQEVLAKYPGIVAGIQGLEEQGFPVLVKDASLGGEFPVMCVTLMNPRTGGVFASFGA
HPSFEVALERSLTELLQGRSFEGLNDLPQPTFESHALTEPNNFVEHFIDSSGVVSWRFFS
AKADFEFVEWDFSGEGQDSNVQEAQTLFGILEEQGKEVYMAVYTDLGATACRILVPGYSE
IYPVEDLIWDNTNRALEFRSDILNLHKLDNRNLKLLLKRLDNAEVDDYTTITTLIGVEFD
DNTVWGQLTILELKLLVHLVLQRFDDAKELVEMFLQFNDNTVERGLFYQALNVVLEVVLD
DELEMADYEGNFRRMFGNERMDAVLGSVDGSVRFHGLTPTSMKLEGLDRHLRLVESYKKL
HAARGRVAQG
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcaaggtcaattttctcgacaaccttcgtctcgaagccaagttcgacgacttc
acggtgatcgccgaccagccgatccgctacaagggcgacggctcggcgccggggccgttc
gactacttcctggcgtcctcggcgctgtgtgcggcgtacttcgtcaagctgtactgccag
acccgcgacatccctaccgagaacatccgcctgtcgcagaacaacatcgtcgacccggag
aaccgctacaaccagatcttcaagatccaggtcgagctgcccgaggacatcagcgagaag
gaccgccagggcatcctgcgttccatcgaccgctgcacggtgaagaaggtggtgcagacc
ggccctgagttcatcatcgagcaggtcgacaacctcgacgccgacgcccaggcgctgctg
atgccggtgtccgacagccagacgctgatcgccggcaaggacctgccgctggagcagacc
atcgccaacatgtcggcgatcctggccgggctcggcatgaagatcgagatcgcttcgtgg
cgcaacattgtgcccaacgtgtggtcgctgcatgtgcgcgacgcgcaatcgccgatgtgc
ttcaccaacggcaagggcgccaccaaggaagccgcgctggcttcggcgctgggcgagttc
atcgagcggttgaactgcaacttcttctacaacgaccagttctggggcgaggacatcgcc
aacgcgccgttcgtgcactacccgaacgagcagtggttcctgcccggcccgaaggacgcg
ttgccggccgagattctcgatgagtactgcctggagatcttcaacccggacggcgagctg
cgtggctcgcacctgtacgacaccaactcgggcaacaaggcgcgtggcatctgctcgctg
ccgttcgtgcgccagtcggacggcgagacggtgtacttcccgtccaacctgatcgagaac
ctgtacctgagcaacggcatgagcgccggcaacaccttggccgaggcccaggtgcagtgc
ctgtcggagattttcgagcgggcggtgaagcgcgaaatcctcgagggcgagctgtgcctg
ccggacgtgccgcaagaggtgctggccaagtacccgggcatcgtcgccggcattcagggg
ctggaggagcagggcttcccggtgctggtcaaggatgcctcgctgggcggtgaattcccg
gtgatgtgcgtgaccctgatgaacccgcgcaccggtggcgtgttcgcctcgttcggcgcc
cacccaagcttcgaggtggcgctggagcgcagcctcaccgagttgctgcaggggcgtagc
ttcgagggcttgaacgacctgccgcagccgacgttcgaaagccatgcgctgaccgaaccg
aacaacttcgtcgagcacttcatcgactccagcggcgtggtgtcgtggcgcttcttcagc
gccaaggccgatttcgagttcgtcgagtgggacttctcgggcgagggccaggactctaac
gtgcaggaggcgcagacgttgttcggcatcctcgaggagcagggcaaggaggtgtacatg
gcggtgtacaccgacctgggcgccacggcttgccgcattctggtgccgggttattcggag
atctacccggtggaggacctgatctgggacaacaccaaccgggcgctggaattccgtagc
gacatcctcaacctgcacaagctcgacaaccgcaacctgaagctgttgctcaagcgcctg
gacaacgccgaggtggacgattacaccaccatcaccacgctgattggcgttgagttcgac
gacaacacggtgtggggccaactgaccatccttgagctgaagctgctggtgcacctggtg
ctgcagcgcttcgacgatgccaaggagctggtggagatgttccttcagttcaacgacaac
acggttgagcgtgggttgttctaccaggcgctgaacgtggtgctggaggtggtgctggat
gacgagctggagatggccgactacgagggtaatttccgccgcatgttcggtaacgagcgg
atggatgcggtgctggggtcggtggatggcagtgtgcggttccatgggctgacgcctacc
agcatgaagcttgaggggcttgatcggcatttgcggttggtggagagctacaagaagctg
catgcggcgcggggtagggttgctcagggctga
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