Pseudomonas xanthosomatis: KSS93_16065
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Entry
KSS93_16065 CDS
T07606
Symbol
xthA
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
pxa
Pseudomonas xanthosomatis
Pathway
pxa03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pxa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KSS93_16065 (xthA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pxa03400
]
KSS93_16065 (xthA)
Enzymes [BR:
pxa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
KSS93_16065 (xthA)
DNA repair and recombination proteins [BR:
pxa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
KSS93_16065 (xthA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
QXH44403
LinkDB
All DBs
Position
complement(3592771..3593583)
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AA seq
270 aa
AA seq
DB search
MKVVSFNINGLRARPHQLAALIDKHQPDVIGLQETKVSDDQFPLADVQALGYHVHYHGQK
GHYGVALLSRQAPLEIHKGFSTDEEDAQRRFIWGTFADANGTPITVMNGYFPQGESRDHP
TKFPAKQRFYADLQALLESQFKNDQPLLVMGDVNISPQDCDIGIGADNAKRWLKTGKCSF
LPEEREWMERLKGWGLVDSFRHLHPEVADRFSWFDYRSRGFEDEPKRGLRIDLIMASQGL
LPRVKAAGVDYELRGMEKPSDHAPIWLELS
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtcgtctctttcaacatcaacggcctgcgcgcacgcccgcatcagttggcggcg
ctgatcgacaagcaccagccagacgtgatcggcctgcaggaaaccaaggtcagcgacgac
cagttccctctcgccgatgttcaggcgctgggctaccacgtgcactaccacggccagaag
ggccactacggcgtggctctgctgtcgcgtcaggcgccgctggagattcacaaggggttc
agcaccgatgaagaagatgcccagcggcgcttcatctggggcaccttcgccgacgccaac
ggcacgcccattaccgtgatgaacggttacttcccacaaggcgaaagccgcgaccacccc
accaagttcccggccaagcagcgcttttacgccgacctgcaggccctgctggaaagccaa
ttcaagaatgaccagcctttgctggtgatgggcgatgtgaacatctcgccgcaagattgc
gacatcggcattggcgccgacaacgccaagcgctggttgaagaccggcaagtgcagcttt
ttgcccgaagagcgcgaatggatggaacgcctcaagggctggggcctggtggacagcttc
cgccacctgcacccggaagtggctgaccgcttcagctggttcgactaccgcagccggggc
tttgaggacgagcccaagcgcggcctgcgcatcgacctgatcatggcctcgcaagggctg
ctgccacgggtcaaggccgctggcgtggactacgagctgcgcggcatggaaaaaccttcg
gaccacgcaccgatctggctggagctaagctga
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