KEGG   Pseudomonas xanthosomatis: KSS93_16085
Entry
KSS93_16085       CDS       T07606                                 
Symbol
alkB
Name
(GenBank) DNA oxidative demethylase AlkB
  KO
K03919  DNA oxidative demethylase [EC:1.14.11.33]
Organism
pxa  Pseudomonas xanthosomatis
Brite
KEGG Orthology (KO) [BR:pxa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pxa03400]
    KSS93_16085 (alkB)
Enzymes [BR:pxa01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.33  DNA oxidative demethylase
     KSS93_16085 (alkB)
DNA repair and recombination proteins [BR:pxa03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   Direct repair
    KSS93_16085 (alkB)
SSDB
Motif
Pfam: 2OG-FeII_Oxy_2
Other DBs
NCBI-ProteinID: QXH44407
LinkDB
Position
complement(3599941..3600585)
AA seq 214 aa
MIQSPLDLFGPEPQQLAPHTMLLPGFALAEVEPLLDALRPALKAAPLRHMRTPGGLPMAV
ALSNCGALGWVSDEHGYRYTALDPQSNQPWPPMPLLLQALASRAAALAGFEGFVPDACLV
NHYRPGDRLSLHQDRDERDFSQPIVSVSLGLPAVFLLGGLQRSEPARRIALNHADVLVWG
GEDRLRFHGVLPIKPGVHARLGERRINLTLRKAG
NT seq 645 nt   +upstreamnt  +downstreamnt
atgatccagtcgcccctagacctgttcggccccgaacctcagcagttggccccccatacg
atgctgctgccgggcttcgccctggccgaagtcgaaccgctgctggacgccctgcgcccg
gcactcaaggcggcgccgctgcggcacatgcgtacccctggcggcttgccgatggccgtg
gccctgagcaactgcggggcgctgggctgggtcagcgacgagcatggctatcgctacacc
gcgctcgacccacagagcaaccagccctggccgcccatgcccttgctgctccaggcgctg
gccagccgcgcggctgcgctggccgggttcgaggggttcgtgccggatgcctgcctggtc
aaccactaccggcccggcgatcgcctgagcctgcatcaggaccgcgatgagcgggacttc
agccagcccatcgtgtcggtttcgctggggttgcctgcagtgttcctgcttggcggtttg
cagcgcagtgaacctgcccggcgtatagcgctgaaccatgctgatgtgctggtttgggga
ggtgaggacaggcttcggttccatggggtgctgccgatcaagcctggcgtgcatgcacgt
ttgggggagcggcggatcaaccttaccttgcgcaaggcggggtga

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